1FVN Hormone Growth Factor date Sep 20, 2000
title [Ala31, Aib32]-Neuropeptide Y
authors R.Bader, O.Zerbe, A.G.Beck-Sickinger
compound source
Molecule: Neuropeptide Y
Chain: A
Engineered: Yes
Mutation: Yes
 Synthetic: Yes
Other_details: The Peptide Was A Designed Synthetic Molecul Sequence Of The Peptide Is Derived From Npy Naturally Found Scrofa (Pig).
methodSolution NMR
ligand AIB, NH2 enzyme
related structures by homologous chain: 1F8P, 1RON
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceThe first selective agonist for the neuropeptide YY5 receptor increases food intake in rats., Cabrele C, Langer M, Bader R, Wieland HA, Doods HN, Zerbe O, Beck-Sickinger AG, J Biol Chem 2000 Nov 17;275(46):36043-8. PMID:10944518
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (294 Kb) [Save to disk]
  • Biological Unit Coordinates (1fvn.pdb1.gz) 10 Kb
  • LPC: Ligand-Protein Contacts for 1FVN
  • CSU: Contacts of Structural Units for 1FVN
  • Original NMR restraints for 1FVN from PDB
  • Retrieve 1FVN in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1FVN from S2C, [Save to disk]
    • View 1FVN in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 1FVN
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1FVN, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1fvna_, region A [Jmol] [rasmolscript] [script source]
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1fvn_A] [1fvn]
  • SWISS-PROT database: [P01304]
  • Domain organization of [NPY_PIG] by SWISSPFAM
  • Domain found in 1FVN: [PAH ] by SMART
    • Other resources with information on 1FVN
  • Community annotation for 1FVN at PDBWiki (http://pdbwiki.org)
  • NMR Ensemble (OLDERADO: core, domain and representative structure database)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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