1G2N Gene Regulation date Oct 20, 2000
title Crystal Structure Of The Ligand Binding Domain Of The Ultras Protein Usp, The Ortholog Of Rxrs In Insects
authors I.M.L.Billas, L.Moulinier, N.Rochel, D.Moras, Structural Proteom Europe (Spine)
compound source
Molecule: Ultraspiracle Protein
Chain: A
Fragment: Ligand Binding Domain
Engineered: Yes
Organism_scientific: Heliothis Virescens
Organism_common: Tobacco Budworm
Organism_taxid: 7102
Gene: Usp Locus
Expression_system: Escherichia Coli Bl21(De3)
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet15b
symmetry Space Group: P 43 2 2
R_factor 0.210 R_Free 0.244
crystal
cell
length a length b length c angle alpha angle beta angle gamma
58.211 58.211 144.687 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.65 Å
ligand EPH enzyme
related structures by homologous chain: 1R1K
Gene
Ontology
ChainFunctionProcessComponent
A
  • steroid hormone receptor act...


  • Primary referenceCrystal structure of the ligand-binding domain of the ultraspiracle protein USP, the ortholog of retinoid X receptors in insects., Billas IM, Moulinier L, Rochel N, Moras D, J Biol Chem 2001 Mar 9;276(10):7465-74. PMID:11053444
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (52 Kb) [Save to disk]
  • Biological Unit Coordinates (1g2n.pdb1.gz) 47 Kb
  • LPC: Ligand-Protein Contacts for 1G2N
  • CSU: Contacts of Structural Units for 1G2N
  • Likely Quarternary Molecular Structure file(s) for 1G2N
  • Structure Factors (297 Kb)
  • Retrieve 1G2N in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1G2N from S2C, [Save to disk]
  • Re-refined 1g2n structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 1G2N in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1G2N
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1G2N, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1g2na_, region A [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1g2n_A] [1g2n]
  • SWISS-PROT database: [Q7SIF6]
  • Domain organization of [Q7SIF6_HELVI] by SWISSPFAM
  • Domain found in 1G2N: [HOLI ] by SMART
  • Other resources with information on 1G2N
  • Community annotation for 1G2N at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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