1G49	Hydrolase	date	Oct 26, 2000
title	A Carboxylic Acid Based Inhibitor In Complex With Mmp3
authors	M.G.Natchus, R.G.Bookland, B.De, N.G.Almstead, S.Pikul
compound		source
Molecule: Matrix Metalloproteinase 3 Chain: A, B Fragment: Catalytic Domain Synonym: Stromelysin 1, Mmp3, Progelatinase, Transin-1, Sl- Ec: 3.4.24.17 Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Cell: Fibroblast Gene: Mmp3 Expression_system: Escherichia Coli Expression_system_taxid: 562
symmetry	Space Group: P 21 21 21	R_factor R_Free 0.253
crystal cell	length a length b length c angle alpha angle beta angle gamma 37.668 77.112 106.145 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	1.90 Å
ligand	111, CA, ZN BindingDB	enzyme	Hydrolase E.C.3.4.24.17 BRENDA
related structures	by homologous chain: 1C3I, 1SLM
Gene Ontology	Chain Function Process Component A, B
Primary reference	Development of new hydroxamate matrix metalloproteinase inhibitors derived from functionalized 4-aminoprolines., Natchus MG, Bookland RG, De B, Almstead NG, Pikul S, Janusz MJ, Heitmeyer SA, Hookfin EB, Hsieh LC, Dowty ME, Dietsch CR, Patel VS, Garver SM, Gu F, Pokross ME, Mieling GE, Baker TR, Foltz DJ, Peng SX, Bornes DM, Strojnowski MJ, Taiwo YO, J Med Chem 2000 Dec 28;43(26):4948-63. PMID:11150165

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (64 Kb) [Save to disk] Biological Unit Coordinates (1g49.pdb1.gz) 30 Kb Biological Unit Coordinates (1g49.pdb2.gz) 30 Kb LPC: Ligand-Protein Contacts for 1G49 CSU: Contacts of Structural Units for 1G49 Likely Quarternary Molecular Structure file(s) for 1G49 Retrieve 1G49 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 1G49 from S2C, [Save to disk]

View 1G49 in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 1G49

Ramachandran plot from PDBSum

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 1G49, from MSDmotif at EBI Classification of representative domains in scop (Structural Classification of Proteins)     - Domain d1g49a_, region A [Jmol] [rasmolscript] [script source]     - Domain d1g49b_, region B [Jmol] [rasmolscript] [script source] Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH Summaries and structural analyses of PDB data files from PDBSum Identification of Protein Pockets & Cavities at CASTp

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1g49_B] [1g49] [1g49_A] SWISS-PROT database: [P08254] Domain organization of [MMP3_HUMAN] by SWISSPFAM Domain found in 1G49: [ZnMc ] by SMART

Other resources with information on 1G49

Community annotation for 1G49 at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

Movements, Movies and Images

Images from IMB Jena Image Library of Biological Macromolecules.

You may enter another PDB ID code

Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]

---

OCA© by Jaime Prilusky, 1996-2014,2022 Bioinformatics Unit Weizmann Institute of Science

---