1G4H	Hydrolase	date	Oct 27, 2000
title	Linb Complexed With Butan-1-Ol
authors	A.J.Oakley, Z.Prokop, M.Bohac, J.Kmunicek, T.Jedlicka, M.Monincov Smatanova, Y.Nagata, J.Damborsky, M.C.J.Wilce
compound		source
Molecule: 1,3,4,6-Tetrachloro-1,4-Cyclohexadiene Hydrolase Chain: A Synonym: 1,4-Tcdn Chlorohydrolase Ec: 3.8.1.- Engineered: Yes Mutation: Yes		Organism_scientific: Sphingomonas Paucimobilis Organism_taxid: 13689 Gene: Linb Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_strain: Hb101 Expression_system_vector_type: Plasmid Expression_system_plasmid: Pmlbh6
symmetry	Space Group: P 21 21 2	R_factor 0.181 R_Free 0.201
crystal cell	length a length b length c angle alpha angle beta angle gamma 50.800 72.040 73.340 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	1.80 Å
ligand	1BO, 2MR, CA, CL	enzyme	Hydrolase E.C.3.8.1 BRENDA
related structures	by homologous chain: 1G5F, 1K6E
Gene Ontology	Chain Function Process Component A
Primary reference	Exploring the structure and activity of haloalkane dehalogenase from Sphingomonas paucimobilis UT26: evidence for product- and water-mediated inhibition., Oakley AJ, Prokop Z, Bohac M, Kmunicek J, Jedlicka T, Monincova M, Kuta-Smatanova I, Nagata Y, Damborsky J, Wilce MC, Biochemistry 2002 Apr 16;41(15):4847-55. PMID:11939779

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (56 Kb) [Save to disk] Biological Unit Coordinates (1g4h.pdb1.gz) 51 Kb LPC: Ligand-Protein Contacts for 1G4H CSU: Contacts of Structural Units for 1G4H Likely Quarternary Molecular Structure file(s) for 1G4H Structure Factors (165 Kb) Retrieve 1G4H in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 1G4H from S2C, [Save to disk] Re-refined 1g4h structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 1G4H in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 1G4H

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 1G4H, from MSDmotif at EBI Classification of representative domains in scop (Structural Classification of Proteins)     - Domain d1g4ha_, region A [Jmol] [rasmolscript] [script source] Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH Summaries and structural analyses of PDB data files from PDBSum Identification of Protein Pockets & Cavities at CASTp

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1g4h] [1g4h_A] SWISS-PROT database: [P51698] Domain organization of [LINB_PSEPA] by SWISSPFAM

Other resources with information on 1G4H

Community annotation for 1G4H at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

Movements, Movies and Images

Images from IMB Jena Image Library of Biological Macromolecules.

You may enter another PDB ID code

Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]

---

OCA© by Jaime Prilusky, 1996-2014,2022 Bioinformatics Unit Weizmann Institute of Science

---