1G4Q RNA/DNA HYBRID DECAMER OF CAAAGAAAAG/CTTTTCTTTG date
authors Han, G.W.
compound source
symmetry
R_factor
R_Free 0.186
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 1.15
ligand CA, MPD enzyme
Primary referenceDirect-methods determination of an RNA/DNA hybrid decamer at 1.15 A resolution., Han GW, Acta Crystallogr D Biol Crystallogr 2001 Feb;57(Pt 2):213-8. PMID:11173466
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (24 Kb) [Save to disk]
  • Biological Unit Coordinates (1g4q.pdb1.gz) 20 Kb
  • LPC: Ligand-Protein Contacts for 1G4Q
  • CSU: Contacts of Structural Units for 1G4Q
  • Likely Quarternary Molecular Structure file(s) for 1G4Q
  • Structure Factors (168 Kb)
  • Retrieve 1G4Q in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1G4Q from S2C, [Save to disk]
  • Re-refined 1g4q structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 1G4Q in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1G4Q
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1G4Q, from MSDmotif at EBI
  • Structure summary from SCOR (Structural Classification of RNA)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1g4q] [1g4q_A] [1g4q_B]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 1G4Q
  • Community annotation for 1G4Q at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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