1G7W Transferase date Nov 15, 2000
title Aspartate Aminotransferase Active Site Mutant N194ar386l
authors H.Mizuguchi, H.Hayashi, K.Okada, I.Miyahara, K.Hirotsu, H.Kagamiy
compound source
Molecule: Aspartate Aminotransferase
Chain: A
Ec: 2.6.1.1
Engineered: Yes
Mutation: Yes
Organism_scientific: Escherichia Coli
Organism_taxid: 562
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: C 2 2 21
R_factor 0.217 R_Free NULL
crystal
cell
length a length b length c angle alpha angle beta angle gamma
154.940 89.330 79.960 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.20 Å
ligand PLP enzyme Transferase E.C.2.6.1.1 BRENDA
related structures by homologous chain: 1AIA, 1G7X
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceStrain is more important than electrostatic interaction in controlling the pKa of the catalytic group in aspartate aminotransferase., Mizuguchi H, Hayashi H, Okada K, Miyahara I, Hirotsu K, Kagamiyama H, Biochemistry 2001 Jan 16;40(2):353-60. PMID:11148029
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (70 Kb) [Save to disk]
  • Biological Unit Coordinates (1g7w.pdb1.gz) 127 Kb
  • LPC: Ligand-Protein Contacts for 1G7W
  • CSU: Contacts of Structural Units for 1G7W
  • Likely Quarternary Molecular Structure file(s) for 1G7W
  • Retrieve 1G7W in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1G7W from S2C, [Save to disk]
  • View 1G7W in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1G7W
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1G7W, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1g7wa_, region A [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1g7w_A] [1g7w]
  • SWISS-PROT database: [P00509]
  • Domain organization of [AAT_ECOLI] by SWISSPFAM
  • Other resources with information on 1G7W
  • Community annotation for 1G7W at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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