1GAL Oxidoreductase(Flavoprotein) date Aug 27, 1992
title Crystal Structure Of Glucose Oxidase From Aspergillus Niger: At 2.3 Angstroms Resolution
authors H.J.Hecht, K.Kalisz, J.Hendle, R.D.Schmid, D.Schomburg
compound source
Molecule: Glucose Oxidase
Chain: A
Ec: 1.1.3.4
Engineered: Yes
 Organism_scientific: Aspergillus Niger
Organism_taxid: 5061
symmetry Space Group: P 31 2 1
R_factor 0.181 R_Free NULL
crystal
cell
length a length b length c angle alpha angle beta angle gamma
66.500 66.500 214.500 90.00 90.00 120.00
method X-Ray Diffractionresolution 2.30 Å
ligand BMA, FAD, MAN, NAG enzyme Oxidoreductase E.C.1.1.3.4 BRENDA
related structures by homologous chain: 1CF3
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceCrystal structure of glucose oxidase from Aspergillus niger refined at 2.3 A resolution., Hecht HJ, Kalisz HM, Hendle J, Schmid RD, Schomburg D, J Mol Biol 1993 Jan 5;229(1):153-72. PMID:8421298
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (94 Kb) [Save to disk]
  • Biological Unit Coordinates (1gal.pdb1.gz) 89 Kb
  • LPC: Ligand-Protein Contacts for 1GAL
  • CSU: Contacts of Structural Units for 1GAL
  • Likely Quarternary Molecular Structure file(s) for 1GAL
  • Structure Factors (167 Kb)
  • Retrieve 1GAL in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1GAL from S2C, [Save to disk]
  • Re-refined 1gal structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 1GAL in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 1GAL
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1GAL, from MSDmotif at EBI
  • Genome occurence of 1GAL's fold from GeneCensus
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1gal_1, region 3-324,521-583 [Jmol] [rasmolscript] [script source]
        - Domain d1gal_2, region 325-520 [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1gal] [1gal_A]
  • SWISS-PROT database: [P13006]
  • Domain organization of [GOX_ASPNG] by SWISSPFAM
    • Other resources with information on 1GAL
  • Community annotation for 1GAL at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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