1GUF Oxidoreductase date Jan 25, 2002
title Enoyl Thioester Reductase From Candida Tropicalis
authors T.T.Airenne, J.M.Torkko, S.Van Der Plas, R.T.Sormunen, A.J.Kasta R.K.Wierenga, J.K.Hiltunen
compound source
Molecule: Enoyl-[Acyl-Carrier-Protein] Reductase [Nadph, B- 1, Mitochondrial;
Chain: A, B
Synonym: 2,4-Dienoyl-Coa Reductase, Trans-2-Enoyl-Coa Reduc Enoyl Thioester Reductase;
Ec: 1.3.1.10, 1.3.1.38
Engineered: Yes
Organism_scientific: Candida Tropicalis
Organism_taxid: 5482
Strain: Pk233
Atcc: 20336
Expression_system: Saccharomyces Cerevisiae
Expression_system_common: Baker'S Yeast
Expression_system_taxid: 4932
Expression_system_strain: Bj1991
symmetry Space Group: P 31 2 1
R_factor 0.178 R_Free 0.215
crystal
cell
length a length b length c angle alpha angle beta angle gamma
92.170 92.170 225.660 90.00 90.00 120.00
method X-Ray Diffractionresolution 2.25 Å
ligand GOL, NDP, SO4 enzyme Oxidoreductase E.C.1.3.1.10 BRENDA
related structures by homologous chain: 1GYR, 1H0K
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceStructure-function analysis of enoyl thioester reductase involved in mitochondrial maintenance., Airenne TT, Torkko JM, Van den plas S, Sormunen RT, Kastaniotis AJ, Wierenga RK, Hiltunen JK, J Mol Biol 2003 Mar 14;327(1):47-59. PMID:12614607
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (132 Kb) [Save to disk]
  • Biological Unit Coordinates (1guf.pdb1.gz) 126 Kb
  • LPC: Ligand-Protein Contacts for 1GUF
  • CSU: Contacts of Structural Units for 1GUF
  • Likely Quarternary Molecular Structure file(s) for 1GUF
  • Structure Factors (314 Kb)
  • Retrieve 1GUF in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1GUF from S2C, [Save to disk]
  • Re-refined 1guf structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 1GUF in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1GUF
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1GUF, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1gufa2, region A:161-349 [Jmol] [rasmolscript] [script source]
        - Domain d1gufa1, region A:23-160,A:350-386 [Jmol] [rasmolscript] [script source]
        - Domain d1gufb2, region B:161-349 [Jmol] [rasmolscript] [script source]
        - Domain d1gufb1, region B:23-160,B:350-386 [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1guf] [1guf_B] [1guf_A]
  • SWISS-PROT database: [Q8WZM3]
  • Domain organization of [ETR1_CANTR] by SWISSPFAM
  • Other resources with information on 1GUF
  • Community annotation for 1GUF at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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