1H6F	Transcription Factor	date	Jun 13, 2001
title	Human Tbx3, A Transcription Factor Responsible For Ulnar-Mam Syndrome, Bound To A Palindromic Dna Site
authors	M.Coll, C.W.Muller
compound		source
Molecule: T-Box Transcription Factor Tbx3 Chain: A, B Fragment: T-Domain Residues 101-291 Synonym: Tbx3 Transcription Factor, T-Box Protein 3 Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Expression_system: Escherichia Coli Bl21(De3) Expression_system_taxid: 469008 Expression_system_plasmid: Pt7-7
Molecule: 5'-D(Tpapaptptptpcpapcpapcpcptp Apgpgptpgptpgpapapapt)-3'; Chain: C, D Fragment: Palindromic Binding Site Engineered: Yes		Synthetic: Yes Organism_scientific: Synthetic Organism_taxid: 32630
symmetry	Space Group: P 21 21 21	R_factor 0.201 R_Free 0.239
crystal cell	length a length b length c angle alpha angle beta angle gamma 39.040 104.910 125.310 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	1.70 Å
ligand	MG	enzyme
Gene Ontology	Chain Function Process Component A, B
Primary reference	Structure of the DNA-bound T-box domain of human TBX3, a transcription factor responsible for ulnar-mammary syndrome., Coll M, Seidman JG, Muller CW, Structure (Camb) 2002 Mar;10(3):343-56. PMID:12005433

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (98 Kb) [Save to disk] Biological Unit Coordinates (1h6f.pdb1.gz) 92 Kb LPC: Ligand-Protein Contacts for 1H6F CSU: Contacts of Structural Units for 1H6F Likely Quarternary Molecular Structure file(s) for 1H6F Retrieve 1H6F in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 1H6F from S2C, [Save to disk]

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Visual 3D analysis of 1H6F

Ramachandran plot from PDBSum

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 1H6F, from MSDmotif at EBI Classification of representative domains in scop (Structural Classification of Proteins)     - Domain d1h6fa_, region A [Jmol] [rasmolscript] [script source]     - Domain d1h6fb_, region B [Jmol] [rasmolscript] [script source] Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH Summaries and structural analyses of PDB data files from PDBSum Identification of Protein Pockets & Cavities at CASTp

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1h6f_B] [1h6f_A] [1h6f] [1h6f_D] [1h6f_C] SWISS-PROT database: [O15119] Domain organization of [TBX3_HUMAN] by SWISSPFAM Domain found in 1H6F: [TBOX ] by SMART

Other resources with information on 1H6F

Community annotation for 1H6F at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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