1HDH Hydrolase date Nov 16, 2000
title Arylsulfatase From Pseudomonas Aeruginosa
authors I.Boltes, H.Czapinska, A.Kahnert, R.Von Buelow, T.Dirks, B.Schmid Figura, M.A.Kertesz, I.Uson
compound source
Molecule: Arylsulfatase
Chain: A, B
Synonym: As,Aryl-Sulfate Sulphohydrolase
Ec: 3.1.6.1
Engineered: Yes
Organism_scientific: Pseudomonas Aeruginosa
Organism_taxid: 287
Gene: Atsa, Pa0183
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: C 1 2 1
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
188.920 67.290 89.700 90.00 94.20 90.00
method X-Ray Diffractionresolution 1.30 Å
ligand CA, DDZ, SO4 enzyme Hydrolase E.C.3.1.6.1 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary reference1.3 A structure of arylsulfatase from Pseudomonas aeruginosa establishes the catalytic mechanism of sulfate ester cleavage in the sulfatase family., Boltes I, Czapinska H, Kahnert A, von Bulow R, Dierks T, Schmidt B, von Figura K, Kertesz MA, Uson I, Structure (Camb) 2001 Jun;9(6):483-91. PMID:11435113
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (186 Kb) [Save to disk]
  • Biological Unit Coordinates (1hdh.pdb1.gz) 93 Kb
  • Biological Unit Coordinates (1hdh.pdb2.gz) 92 Kb
  • LPC: Ligand-Protein Contacts for 1HDH
  • CSU: Contacts of Structural Units for 1HDH
  • Likely Quarternary Molecular Structure file(s) for 1HDH
  • Structure Factors (4766 Kb)
  • Retrieve 1HDH in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1HDH from S2C, [Save to disk]
  • Re-refined 1hdh structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 1HDH in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1HDH
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Conformational Epitope Prediction for 1HDH 1HDHA 1HDHB from the CEP Server.
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1HDH, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1hdha_, region A [Jmol] [rasmolscript] [script source]
        - Domain d1hdhb_, region B [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1hdh_B] [1hdh_A] [1hdh]
  • SWISS-PROT database: [P51691]
  • Domain organization of [ARS_PSEAE] by SWISSPFAM
  • Other resources with information on 1HDH
  • Community annotation for 1HDH at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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