1HL5	Oxidoreductase	date	Mar 13, 2003
title	The Structure Of Holo Type Human Cu, Zn Superoxide Dismutase
authors	R.W.Strange, S.Antonyuk, M.A.Hough, P.Doucette, J.Rodriguez, P.J. L.J.Hayward, J.S.Valentine, S.S.Hasnain
compound		source
Molecule: Superoxide Dismutase Chain: A, H, B, I, C, J, D, K, E, L, F, M, G, N, O, Q, P, S Ec: 1.15.1.1 Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Expression_system: Saccharomyces Cerevisiae Expression_system_taxid: 4932 Expression_system_strain: Eg118 Expression_system_variant: Yep351
symmetry	Space Group: P 1 21 1	R_factor 0.185 R_Free 0.222
crystal cell	length a length b length c angle alpha angle beta angle gamma 76.871 172.380 112.450 90.00 93.45 90.00
method	X-Ray Diffraction	resolution	1.8 Å
ligand	CA, CU, ZN	enzyme	Oxidoreductase E.C.1.15.1.1 BRENDA
related structures	by homologous chain: 1HL4, 1PTZ
Gene Ontology	Chain Function Process Component S, F, N, K, E, Q, M, C, L, A, J, O, P, B, H, D, I, G superoxide dismutase activit... protein binding anterograde axonal transport... retrograde axonal transport
Primary reference	The structure of holo and metal-deficient wild-type human Cu, Zn superoxide dismutase and its relevance to familial amyotrophic lateral sclerosis., Strange RW, Antonyuk S, Hough MA, Doucette PA, Rodriguez JA, Hart PJ, Hayward LJ, Valentine JS, Hasnain SS, J Mol Biol 2003 May 9;328(4):877-91. PMID:12729761

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (445 Kb) [Save to disk] Biological Unit Coordinates (1hl5.pdb1.gz) 57 Kb Biological Unit Coordinates (1hl5.pdb2.gz) 58 Kb Biological Unit Coordinates (1hl5.pdb3.gz) 57 Kb Biological Unit Coordinates (1hl5.pdb4.gz) 57 Kb Biological Unit Coordinates (1hl5.pdb5.gz) 56 Kb Biological Unit Coordinates (1hl5.pdb6.gz) 54 Kb Biological Unit Coordinates (1hl5.pdb7.gz) 55 Kb Biological Unit Coordinates (1hl5.pdb8.gz) 55 Kb Biological Unit Coordinates (1hl5.pdb9.gz) 52 Kb LPC: Ligand-Protein Contacts for 1HL5 CSU: Contacts of Structural Units for 1HL5 Likely Quarternary Molecular Structure file(s) for 1HL5 Structure Factors (2001 Kb) Retrieve 1HL5 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 1HL5 from S2C, [Save to disk] Re-refined 1hl5 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 1HL5 in 3D

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Visual 3D analysis of 1HL5

Ramachandran plot from PDBSum

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 1HL5, from MSDmotif at EBI Classification of representative domains in scop (Structural Classification of Proteins)     - Domain d1hl5a_, region A [Jmol] [rasmolscript] [script source]     - Domain d1hl5b_, region B [Jmol] [rasmolscript] [script source]     - Domain d1hl5c_, region C [Jmol] [rasmolscript] [script source]     - Domain d1hl5d_, region D [Jmol] [rasmolscript] [script source]     - Domain d1hl5e_, region E [Jmol] [rasmolscript] [script source]     - Domain d1hl5f_, region F [Jmol] [rasmolscript] [script source]     - Domain d1hl5g_, region G [Jmol] [rasmolscript] [script source]     - Domain d1hl5h_, region H [Jmol] [rasmolscript] [script source]     - Domain d1hl5i_, region I [Jmol] [rasmolscript] [script source]     - Domain d1hl5j_, region J [Jmol] [rasmolscript] [script source]     - Domain d1hl5k_, region K [Jmol] [rasmolscript] [script source]     - Domain d1hl5l_, region L [Jmol] [rasmolscript] [script source]     - Domain d1hl5m_, region M [Jmol] [rasmolscript] [script source]     - Domain d1hl5n_, region N [Jmol] [rasmolscript] [script source]     - Domain d1hl5o_, region O [Jmol] [rasmolscript] [script source]     - Domain d1hl5p_, region P [Jmol] [rasmolscript] [script source]     - Domain d1hl5q_, region Q [Jmol] [rasmolscript] [script source]     - Domain d1hl5s_, region S [Jmol] [rasmolscript] [script source] Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH Summaries and structural analyses of PDB data files from PDBSum Identification of Protein Pockets & Cavities at CASTp

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1hl5_E] [1hl5_J] [1hl5_F] [1hl5_Q] [1hl5_K] [1hl5_P] [1hl5_M] [1hl5_L] [1hl5_S] [1hl5] [1hl5_D] [1hl5_C] [1hl5_B] [1hl5_G] [1hl5_O] [1hl5_A] [1hl5_H] [1hl5_I] [1hl5_N] SWISS-PROT database: [P00441] Domain organization of [SODC_HUMAN] by SWISSPFAM

Other resources with information on 1HL5

Community annotation for 1HL5 at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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