1HN2 Protein Binding date Dec 05, 2000
title Crystal Structure Of Bovine Obp Complexed With Aminoanthrace
authors F.Vincent, S.Spinelli, M.Tegoni, C.Cambillau
compound source
Molecule: Odorant-Binding Protein
Chain: A, B
Synonym: Obp
 Organism_scientific: Bos Taurus
Organism_common: Cattle
Organism_taxid: 9913
symmetry Space Group: P 1 21 1
R_factor 0.202 R_Free 0.223
crystal
cell
length a length b length c angle alpha angle beta angle gamma
55.589 65.091 42.249 90.00 98.29 90.00
method X-Ray Diffractionresolution 1.80 Å
ligand 3OL, ANC enzyme
related structures by homologous chain: 1G85, 1GT3
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceThe insect attractant 1-octen-3-ol is the natural ligand of bovine odorant-binding protein., Ramoni R, Vincent F, Grolli S, Conti V, Malosse C, Boyer FD, Nagnan-Le Meillour P, Spinelli S, Cambillau C, Tegoni M, J Biol Chem 2001 Mar 9;276(10):7150-5. PMID:11114310
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (60 Kb) [Save to disk]
  • Biological Unit Coordinates (1hn2.pdb1.gz) 55 Kb
  • LPC: Ligand-Protein Contacts for 1HN2
  • CSU: Contacts of Structural Units for 1HN2
  • Likely Quarternary Molecular Structure file(s) for 1HN2
  • Structure Factors (190 Kb)
  • Retrieve 1HN2 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1HN2 from S2C, [Save to disk]
  • Re-refined 1hn2 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 1HN2 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 1HN2
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1HN2, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1hn2a_, region A [Jmol] [rasmolscript] [script source]
        - Domain d1hn2b_, region B [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1hn2_A] [1hn2] [1hn2_B]
  • SWISS-PROT database: [P07435]
  • Domain organization of [OBP_BOVIN] by SWISSPFAM
    • Other resources with information on 1HN2
  • Community annotation for 1HN2 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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