1HY7	Hydrolase	date	Jan 18, 2001
title	A Carboxylic Acid Based Inhibitor In Complex With Mmp3
authors	M.G.Natchus, R.G.Bookland, M.J.Laufersweiler, S.Pikul, N.G.Almst M.J.Janusz, L.C.Hsieh, F.Gu, M.E.Pokross, V.S.Patel, S.M.Garver, T.M.Branch, S.L.King, T.R.Baker, D.J.Foltz, G.E.Mieling
compound		source
Molecule: Stromelysin-1 Chain: A, B Fragment: Catalytic Domain, Residues 100-272 Synonym: Mmp-3 Ec: 3.4.24.17 Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Cell: Fibroblast Gene: Mmp3 Expression_system: Escherichia Coli Expression_system_taxid: 562
symmetry	Space Group: P 21 21 21	R_factor 0.188 R_Free 0.220
crystal cell	length a length b length c angle alpha angle beta angle gamma 37.918 78.059 105.801 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	1.50 Å
ligand	CA, MBS, ZN BindingDB	enzyme	Hydrolase E.C.3.4.24.17 BRENDA
related structures	by homologous chain: 1HFC, 830C
Gene Ontology	Chain Function Process Component A, B
Primary reference	Development of new carboxylic acid-based MMP inhibitors derived from functionalized propargylglycines., Natchus MG, Bookland RG, Laufersweiler MJ, Pikul S, Almstead NG, De B, Janusz MJ, Hsieh LC, Gu F, Pokross ME, Patel VS, Garver SM, Peng SX, Branch TM, King SL, Baker TR, Foltz DJ, Mieling GE, J Med Chem 2001 Mar 29;44(7):1060-71. PMID:11297453

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (67 Kb) [Save to disk] Biological Unit Coordinates (1hy7.pdb1.gz) 31 Kb Biological Unit Coordinates (1hy7.pdb2.gz) 32 Kb Biological Unit Coordinates (1hy7.pdb3.gz) 61 Kb Biological Unit Coordinates (1hy7.pdb4.gz) 60 Kb LPC: Ligand-Protein Contacts for 1HY7 CSU: Contacts of Structural Units for 1HY7 Likely Quarternary Molecular Structure file(s) for 1HY7 Retrieve 1HY7 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 1HY7 from S2C, [Save to disk]

View 1HY7 in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 1HY7

Ramachandran plot from PDBSum

Structure-derived information

Conformational Epitope Prediction for 1HY7 1HY7A 1HY7B from the CEP Server. Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 1HY7, from MSDmotif at EBI Classification of representative domains in scop (Structural Classification of Proteins)     - Domain d1hy7a_, region A [Jmol] [rasmolscript] [script source]     - Domain d1hy7b_, region B [Jmol] [rasmolscript] [script source] Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH Summaries and structural analyses of PDB data files from PDBSum Identification of Protein Pockets & Cavities at CASTp

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1hy7_B] [1hy7] [1hy7_A] SWISS-PROT database: [P08254] Domain organization of [MMP3_HUMAN] by SWISSPFAM Domain found in 1HY7: [ZnMc ] by SMART

Other resources with information on 1HY7

Community annotation for 1HY7 at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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