1IAD Zinc Endopeptidase date May 09, 1994
title Refined 1.8 Angstroms X-Ray Crystal Structure Of Astacin, A Zinc-Endopeptidase From The Crayfish Astacus Astacus L. Structure Determination, Refinement, Molecular Structure And Comparison To Thermolysin
authors F.X.Gomis-Rueth, W.Stoecker, W.Bode
compound source
Molecule: Astacin
Chain: A
Ec: 3.4.24.21
Engineered: Yes
Organism_scientific: Astacus Astacus
Organism_common: Broad-Fingered Crayfish
Organism_taxid: 6715
symmetry Space Group: P 31 2 1
R_factor 0.155 R_Free NULL
crystal
cell
length a length b length c angle alpha angle beta angle gamma
62.000 62.000 98.870 90.00 90.00 120.00
method X-Ray Diffractionresolution 2.30 Å
ligand
enzyme Hydrolase E.C.3.4.24.21 BRENDA
related structures by homologous chain: 1QJI
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceRefined 1.8 A X-ray crystal structure of astacin, a zinc-endopeptidase from the crayfish Astacus astacus L. Structure determination, refinement, molecular structure and comparison with thermolysin., Gomis-Ruth FX, Stocker W, Huber R, Zwilling R, Bode W, J Mol Biol 1993 Feb 20;229(4):945-68. PMID:8445658
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (40 Kb) [Save to disk]
  • Biological Unit Coordinates (1iad.pdb1.gz) 36 Kb
  • CSU: Contacts of Structural Units for 1IAD
  • Likely Quarternary Molecular Structure file(s) for 1IAD
  • Retrieve 1IAD in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1IAD from S2C, [Save to disk]
  • View 1IAD in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1IAD
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1IAD, from MSDmotif at EBI
  • Genome occurence of 1IAD's fold from GeneCensus
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1iad__, region [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1iad] [1iad_A]
  • SWISS-PROT database: [P07584]
  • Domain organization of [ASTA_ASTFL] by SWISSPFAM
  • Domain found in 1IAD: [ZnMc ] by SMART
  • Other resources with information on 1IAD
  • Community annotation for 1IAD at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

  • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022
    Bioinformatics Unit
    Weizmann Institute of Science