1IMT Toxin date Apr 14, 1998
title Mamba Intestinal Toxin 1, Nmr, 39 Structures
authors J.Boisbouvier, J.P.Albrand, M.Blackledge, M.Jaquinod, H.Schweit M.Lazdunski, D.Marion
compound source
Molecule: Intestinal Toxin 1
Chain: A
Synonym: Mit1
 Organism_scientific: Dendroaspis Polylepis Polylepis
Organism_common: Black Mamba
Organism_taxid: 8620
Strain: Polylepis
Secretion: Venom
methodSolution NMR
note 1IMT is a representative structure
Gene
Ontology
ChainFunctionProcessComponent
A
  • toxin activity


    • Primary referenceA structural homologue of colipase in black mamba venom revealed by NMR floating disulphide bridge analysis., Boisbouvier J, Albrand JP, Blackledge M, Jaquinod M, Schweitz H, Lazdunski M, Marion D, J Mol Biol 1998;283(1):205-19. PMID:9761684
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (762 Kb) [Save to disk]
  • Biological Unit Coordinates (1imt.pdb1.gz) 20 Kb
  • CSU: Contacts of Structural Units for 1IMT
  • Retrieve 1IMT in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1IMT from S2C, [Save to disk]
    • View 1IMT in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 1IMT
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1IMT, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1imt_1, region 1-36 [Jmol] [rasmolscript] [script source]
        - Domain d1imt_2, region 37-80 [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1imt] [1imt_A]
  • SWISS-PROT database: [P25687]
  • Domain organization of [MIT1_DENPO] by SWISSPFAM
    • Other resources with information on 1IMT
  • Community annotation for 1IMT at PDBWiki (http://pdbwiki.org)
  • NMR Ensemble (OLDERADO: core, domain and representative structure database)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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