1J1W	Oxidoreductase	date	Dec 19, 2002
title	Crystal Structure Of The Monomeric Isocitrate Dehydrogenase With Nadp+
authors	Y.Yasutake, S.Watanabe, M.Yao, Y.Takada, N.Fukunaga, I.Tanaka
compound		source
Molecule: Isocitrate Dehydrogenase Chain: A, B, C, D Ec: 1.1.1.42		Organism_scientific: Azotobacter Vinelandii Organism_taxid: 354 Strain: Iam1078
symmetry	Space Group: P 1 21 1	R_factor 0.260 R_Free 0.297
crystal cell	length a length b length c angle alpha angle beta angle gamma 113.496 110.407 133.698 90.00 90.16 90.00
method	X-Ray Diffraction	resolution	3.20 Å
ligand	NAP	enzyme	Oxidoreductase E.C.1.1.1.42 BRENDA
Gene Ontology	Chain Function Process Component A, D, C, B
Primary reference	Crystal structure of the monomeric isocitrate dehydrogenase in the presence of NADP+: insight into the cofactor recognition, catalysis, and evolution., Yasutake Y, Watanabe S, Yao M, Takada Y, Fukunaga N, Tanaka I, J Biol Chem 2003 Sep 19;278(38):36897-904. Epub 2003 Jul 10. PMID:12855708

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (462 Kb) [Save to disk] Biological Unit Coordinates (1j1w.pdb1.gz) 119 Kb Biological Unit Coordinates (1j1w.pdb2.gz) 118 Kb Biological Unit Coordinates (1j1w.pdb3.gz) 118 Kb Biological Unit Coordinates (1j1w.pdb4.gz) 119 Kb LPC: Ligand-Protein Contacts for 1J1W CSU: Contacts of Structural Units for 1J1W Likely Quarternary Molecular Structure file(s) for 1J1W Retrieve 1J1W in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 1J1W from S2C, [Save to disk]

View 1J1W in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 1J1W

Ramachandran plot from PDBSum

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 1J1W, from MSDmotif at EBI Classification of representative domains in scop (Structural Classification of Proteins)     - Domain d1j1wa_, region A [Jmol] [rasmolscript] [script source]     - Domain d1j1wb_, region B [Jmol] [rasmolscript] [script source]     - Domain d1j1wc_, region C [Jmol] [rasmolscript] [script source]     - Domain d1j1wd_, region D [Jmol] [rasmolscript] [script source]

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1j1w] [1j1w_C] [1j1w_A] [1j1w_D] [1j1w_B] SWISS-PROT database: [P16100] Domain organization of [IDH_AZOVI] by SWISSPFAM

Other resources with information on 1J1W

Community annotation for 1J1W at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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