1J4O Transferase date Oct 03, 2001
title Refined Nmr Structure Of The Fha1 Domain Of Yeast Rad53
authors C.Yuan, S.Yongkiettrakul, I.J.L.Byeon, S.Zhou, M.D.Tsai
compound source
Molecule: Protein Kinase Spk1
Chain: A
Fragment: N-Terminal Fha Domain (Fha1)
Ec: 2.7.1.-
Engineered: Yes
Organism_scientific: Saccharomyces Cerevisiae
Organism_common: Baker'S Yeast
Organism_taxid: 4932
Gene: Spk1 Or Rad53
Expression_system: Escherichia Coli Bl21(De3)
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pgex-4t
methodSolution NMR
ligand
enzyme Transferase E.C.2.7.1 BRENDA
related structures by homologous chain: 1G3G, 1J4P
Primary referenceSolution structures of two FHA1-phosphothreonine peptide complexes provide insight into the structural basis of the ligand specificity of FHA1 from yeast Rad53., Yuan C, Yongkiettrakul S, Byeon IJ, Zhou S, Tsai MD, J Mol Biol 2001 Nov 30;314(3):563-75. PMID:11846567
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (49 Kb) [Save to disk]
  • Biological Unit Coordinates (1j4o.pdb1.gz) 46 Kb
  • CSU: Contacts of Structural Units for 1J4O
  • Retrieve 1J4O in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1J4O from S2C, [Save to disk]
  • View 1J4O in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1J4O
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1J4O, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1j4oa_, region A [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1j4o_A] [1j4o]
  • SWISS-PROT database: [P22216]
  • Domain organization of [RAD53_YEAST] by SWISSPFAM
  • Domain found in 1J4O: [FHA ] by SMART
  • Other resources with information on 1J4O
  • Community annotation for 1J4O at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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