1JEE Transferase date Jun 17, 2001
title Crystal Structure Of Atp Sulfurylase In Complex With Chlorat
authors T.C.Ullrich, R.Huber
compound source
Molecule: Sulfate Adenylyltransferase
Chain: A, B
Ec: 2.7.7.4
 Organism_scientific: Saccharomyces Cerevisiae
Organism_common: Baker'S Yeast
Organism_taxid: 4932
Strain: S288c-Fy1679
Other_details: Native Purification Out Of Yeast Cells
symmetry Space Group: H 3 2
R_factor 0.184 R_Free 0.232
crystal
cell
length a length b length c angle alpha angle beta angle gamma
185.940 185.940 223.812 90.00 90.00 120.00
method X-Ray Diffractionresolution 2.80 Å
ligand ACY, ADX, CA, CD, LCO, MG, NA, POP, TRS enzyme Transferase E.C.2.7.7.4 BRENDA
related structures by homologous chain: 1G8H, 1M8P
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceThe complex structures of ATP sulfurylase with thiosulfate, ADP and chlorate reveal new insights in inhibitory effects and the catalytic cycle., Ullrich TC, Huber R, J Mol Biol 2001 Nov 9;313(5):1117-25. PMID:11700067
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (189 Kb) [Save to disk]
  • Biological Unit Coordinates (1jee.pdb1.gz) 525 Kb
  • LPC: Ligand-Protein Contacts for 1JEE
  • CSU: Contacts of Structural Units for 1JEE
  • Likely Quarternary Molecular Structure file(s) for 1JEE
  • Structure Factors (321 Kb)
  • Retrieve 1JEE in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1JEE from S2C, [Save to disk]
  • Re-refined 1jee structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 1JEE in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 1JEE
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1JEE, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1jeea2, region A:169-389 [Jmol] [rasmolscript] [script source]
        - Domain d1jeea1, region A:2-168 [Jmol] [rasmolscript] [script source]
        - Domain d1jeea3, region A:390-511 [Jmol] [rasmolscript] [script source]
        - Domain d1jeeb2, region B:169-389 [Jmol] [rasmolscript] [script source]
        - Domain d1jeeb1, region B:2-168 [Jmol] [rasmolscript] [script source]
        - Domain d1jeeb3, region B:390-511 [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1jee] [1jee_A] [1jee_B]
  • SWISS-PROT database: [P08536]
  • Domain organization of [MET3_YEAST] by SWISSPFAM
    • Other resources with information on 1JEE
  • Community annotation for 1JEE at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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