1JJI	Hydrolase	date	Jul 06, 2001
title	The Crystal Structure Of A Hyper-Thermophilic Carboxylestera The Archaeon Archaeoglobus Fulgidus
authors	G.De Simone, V.Menchise, G.Manco, L.Mandrich, N.Sorrentino, D.Lan M.Rossi, C.Pedone
compound		source
Molecule: Carboxylesterase Chain: A, B, C, D Ec: 3.1.1.1 Engineered: Yes		Organism_scientific: Archaeoglobus Fulgidus Organism_taxid: 2234 Expression_system: Escherichia Coli Bl21(De3) Expression_system_taxid: 469008 Expression_system_strain: Bl21(De3) Expression_system_vector_type: Plasmid Expression_system_plasmid: Pt7-7scii
symmetry	Space Group: P 62	R_factor 0.203 R_Free 0.235
crystal cell	length a length b length c angle alpha angle beta angle gamma 169.050 169.050 104.544 90.00 90.00 120.00
method	X-Ray Diffraction	resolution	2.20 Å
ligand	EPE	enzyme	Hydrolase E.C.3.1.1.1 BRENDA
Gene Ontology	Chain Function Process Component A, D, C, B
Primary reference	The crystal structure of a hyper-thermophilic carboxylesterase from the archaeon Archaeoglobus fulgidus., De Simone G, Menchise V, Manco G, Mandrich L, Sorrentino N, Lang D, Rossi M, Pedone C, J Mol Biol 2001 Nov 30;314(3):507-18. PMID:11846563

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (215 Kb) [Save to disk] Biological Unit Coordinates (1jji.pdb1.gz) 56 Kb Biological Unit Coordinates (1jji.pdb2.gz) 55 Kb Biological Unit Coordinates (1jji.pdb3.gz) 55 Kb Biological Unit Coordinates (1jji.pdb4.gz) 54 Kb Biological Unit Coordinates (1jji.pdb5.gz) 415 Kb LPC: Ligand-Protein Contacts for 1JJI CSU: Contacts of Structural Units for 1JJI Likely Quarternary Molecular Structure file(s) for 1JJI Structure Factors (719 Kb) Retrieve 1JJI in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 1JJI from S2C, [Save to disk] Re-refined 1jji structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 1JJI in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 1JJI

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 1JJI, from MSDmotif at EBI Classification of representative domains in scop (Structural Classification of Proteins)     - Domain d1jjia_, region A [Jmol] [rasmolscript] [script source]     - Domain d1jjib_, region B [Jmol] [rasmolscript] [script source]     - Domain d1jjic_, region C [Jmol] [rasmolscript] [script source]     - Domain d1jjid_, region D [Jmol] [rasmolscript] [script source] Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH Summaries and structural analyses of PDB data files from PDBSum Identification of Protein Pockets & Cavities at CASTp

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1jji] [1jji_D] [1jji_B] [1jji_C] [1jji_A] SWISS-PROT database: [O28558] Domain organization of [O28558_ARCFU] by SWISSPFAM

Other resources with information on 1JJI

Community annotation for 1JJI at PDBWiki (http://pdbwiki.org) LED, table of lipase structures from Lipase Engineering Database. MMDB (Entrez's Structure Database)

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