1JME Oxidoreductase date Jul 18, 2001
title Crystal Structure Of Phe393his Cytochrome P450 Bm3
authors T.W.B.Ost, A.W.Munro, C.G.Mowat, A.Pesseguiero, A.J.Fulco, A.K.Ch M.A.Cheesman, M.D.Walkinshaw, S.K.Chapman
compound source
Molecule: Bifunctional P-450:Nadph-P450 Reductase
Chain: A, B
Fragment: Cytochrome P450
Synonym: Cytochrome P450 Bm3; Nadph--Ferrihemoprotein Reduc P450bm-3;
Ec: 1.14.14.1
Engineered: Yes
Mutation: Yes
Organism_scientific: Bacillus Megaterium
Organism_taxid: 1404
Gene: Cyp102a1
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Tg1
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pcm81
symmetry Space Group: P 1 21 1
R_factor 0.179 R_Free 0.231
crystal
cell
length a length b length c angle alpha angle beta angle gamma
58.842 153.102 61.479 90.00 94.67 90.00
method X-Ray Diffractionresolution 2.00 Å
ligand HEM enzyme Oxidoreductase E.C.1.14.14.1 BRENDA
related structures by homologous chain: 1P0X, 2BMH
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceStructural and spectroscopic analysis of the F393H mutant of flavocytochrome P450 BM3., Ost TW, Munro AW, Mowat CG, Taylor PR, Pesseguiero A, Fulco AJ, Cho AK, Cheesman MA, Walkinshaw MD, Chapman SK, Biochemistry 2001 Nov 13;40(45):13430-8. PMID:11695889
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (169 Kb) [Save to disk]
  • Biological Unit Coordinates (1jme.pdb1.gz) 163 Kb
  • LPC: Ligand-Protein Contacts for 1JME
  • CSU: Contacts of Structural Units for 1JME
  • Likely Quarternary Molecular Structure file(s) for 1JME
  • Retrieve 1JME in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1JME from S2C, [Save to disk]
  • View 1JME in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1JME
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1JME, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1jmea_, region A [Jmol] [rasmolscript] [script source]
        - Domain d1jmeb_, region B [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1jme_A] [1jme] [1jme_B]
  • SWISS-PROT database: [P14779]
  • Domain organization of [CPXB_BACME] by SWISSPFAM
  • Other resources with information on 1JME
  • Community annotation for 1JME at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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