1JOX Rna date Jul 31, 2001
title Nmr Structure Of The Lp5.1 Hairpin From Bacillus Rnase P Rna With Residual Dipolar Couplings
authors T.C.Leeper, F.J.Schmidt, S.R.Van Doren
compound source
Molecule: 5'-R(Gpgpcpgpgpupgpcpupgpapgpapupg Gpupc)-3';
Chain: A
Engineered: Yes
Other_details: Pl5.1 Hairpin From Rnase P Rna
 Synthetic: Yes
Other_details: In Vitro Transcription
methodSolution NMR
Primary referenceStructure of the UGAGAU hexaloop that braces Bacillus RNase P for action., Leeper TC, Martin MB, Kim H, Cox S, Semenchenko V, Schmidt FJ, Van Doren SR, Nat Struct Biol 2002 May;9(5):397-403. PMID:11927952
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (269 Kb) [Save to disk]
  • Biological Unit Coordinates (1jox.pdb1.gz) 11 Kb
  • CSU: Contacts of Structural Units for 1JOX
  • Original NMR restraints for 1JOX from PDB
  • Retrieve 1JOX in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1JOX from S2C, [Save to disk]
    • View 1JOX in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 1JOX
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1JOX, from MSDmotif at EBI
  • Structure summary from SCOR (Structural Classification of RNA)
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1jox_A] [1jox]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 1JOX
  • Community annotation for 1JOX at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

    • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022
    Bioinformatics Unit
    Weizmann Institute of Science