1JTW Rna date Aug 22, 2001
title Structure Of Sl4 Rna From The Hiv-1 Packaging Signal
authors D.J.Kerwood, M.J.Cavaluzzi, P.N.Borer
compound source
Molecule: 5'-R(Gpgpgpupgpcpgpapgpapgpcpgpupc
Chain: A
Engineered: Yes
Other_details: Hiv-1 Packaging Signal Sl4 Hairpin
 Synthetic: Yes
Other_details: This Sequence Occurs In The Packaging Signal 1.
methodSolution NMR
ligand NA enzyme
Primary referenceStructure of SL4 RNA from the HIV-1 packaging signal., Kerwood DJ, Cavaluzzi MJ, Borer PN, Biochemistry 2001 Dec 4;40(48):14518-29. PMID:11724565
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (129 Kb) [Save to disk]
  • Biological Unit Coordinates (1jtw.pdb1.gz) 9 Kb
  • LPC: Ligand-Protein Contacts for 1JTW
  • CSU: Contacts of Structural Units for 1JTW
  • Original NMR restraints for 1JTW from PDB
  • Retrieve 1JTW in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1JTW from S2C, [Save to disk]
    • View 1JTW in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 1JTW
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1JTW, from MSDmotif at EBI
  • Structure summary from SCOR (Structural Classification of RNA)
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1jtw_A] [1jtw]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 1JTW
  • Community annotation for 1JTW at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

    • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022
    Bioinformatics Unit
    Weizmann Institute of Science