1K9G Crystal Structure of the Complex of Cryptolepine-d(CCTAGG)2 date
authors Lisgarten, J.N., Coll, M., Portugal, J., Wright, C.W., Aymami, J.
compound source
symmetry
R_factor
R_Free 0.2270000
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 1.40
ligand DR1 enzyme
Primary referenceThe antimalarial and cytotoxic drug cryptolepine intercalates into DNA at cytosine-cytosine sites., Lisgarten JN, Coll M, Portugal J, Wright CW, Aymami J, Nat Struct Biol 2002 Jan;9(1):57-60. PMID:11731803
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (8 Kb) [Save to disk]
  • Biological Unit Coordinates (1k9g.pdb1.gz) 6 Kb
  • LPC: Ligand-Protein Contacts for 1K9G
  • CSU: Contacts of Structural Units for 1K9G
  • Likely Quarternary Molecular Structure file(s) for 1K9G
  • Retrieve 1K9G in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1K9G from S2C, [Save to disk]
  • View 1K9G in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1K9G
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1K9G, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1k9g_A] [1k9g]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 1K9G
  • Community annotation for 1K9G at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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