1KL7 Lyase date Dec 11, 2001
title Crystal Structure Of Threonine Synthase From Yeast
authors M.Garrido-Franco, S.Ehlert, A.Messerschmidt, S.Marinkovic, R.Hub B.Laber, G.P.Bourenkov, T.Clausen
compound source
Molecule: Threonine Synthase
Chain: A, B
Ec: 4.2.99.2
Engineered: Yes
Organism_scientific: Saccharomyces Cerevisiae
Organism_common: Baker'S Yeast
Organism_taxid: 4932
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: P 1 21 1
R_factor 0.201 R_Free 0.253
crystal
cell
length a length b length c angle alpha angle beta angle gamma
95.300 51.600 106.900 90.00 99.60 90.00
method X-Ray Diffractionresolution 2.70 Å
ligand MSE, PLP enzyme Lyase E.C.4.2.99.2 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceStructure and function of threonine synthase from yeast., Garrido-Franco M, Ehlert S, Messerschmidt A, Marinkovic' S, Huber R, Laber B, Bourenkov GP, Clausen T, J Biol Chem 2002 Apr 5;277(14):12396-405. PMID:11756443
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (172 Kb) [Save to disk]
  • Biological Unit Coordinates (1kl7.pdb1.gz) 84 Kb
  • Biological Unit Coordinates (1kl7.pdb2.gz) 86 Kb
  • LPC: Ligand-Protein Contacts for 1KL7
  • CSU: Contacts of Structural Units for 1KL7
  • Likely Quarternary Molecular Structure file(s) for 1KL7
  • Structure Factors (241 Kb)
  • Retrieve 1KL7 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1KL7 from S2C, [Save to disk]
  • Re-refined 1kl7 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 1KL7 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1KL7
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1KL7, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1kl7a_, region A [Jmol] [rasmolscript] [script source]
        - Domain d1kl7b_, region B [Jmol] [rasmolscript] [script source]
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1kl7] [1kl7_A] [1kl7_B]
  • SWISS-PROT database: [P16120]
  • Domain organization of [THRC_YEAST] by SWISSPFAM
  • Other resources with information on 1KL7
  • Community annotation for 1KL7 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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