1LQ7 De Novo Protein date May 09, 2002
title De Novo Designed Protein Model Of Radical Enzymes
authors Q.H.Dai, C.Tommos, E.J.Fuentes, M.Blomberg, P.L.Dutton, A.J.Wand
compound source
Molecule: Alpha3w
Chain: A
Engineered: Yes
Other_details: Protein Model For Tryptophanyl Radical
 Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Dh5alpha
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet32
Other_details: De Novo Designsynthetic Gene: Gene Generate Overlapping Pcr Method From Synthetic Oligos
methodSolution NMR
Primary referenceStructure of a de novo designed protein model of radical enzymes., Dai QH, Tommos C, Fuentes EJ, Blomberg MR, Dutton PL, Wand AJ, J Am Chem Soc 2002 Sep 18;124(37):10952-3. PMID:12224922
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (296 Kb) [Save to disk]
  • Biological Unit Coordinates (1lq7.pdb1.gz) 18 Kb
  • CSU: Contacts of Structural Units for 1LQ7
  • Experimental data, such as chemical shifts, at BioMagResBank (BMRB)
  • NMR Restraints Grid from BioMagResBank (BMRB)
  • Retrieve 1LQ7 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1LQ7 from S2C, [Save to disk]
    • View 1LQ7 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 1LQ7
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1LQ7, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1lq7a_, region A [Jmol] [rasmolscript] [script source]
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1lq7_A] [1lq7]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 1LQ7
  • Community annotation for 1LQ7 at PDBWiki (http://pdbwiki.org)
  • NMR Ensemble (OLDERADO: core, domain and representative structure database)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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