1LSG Hybrid Protein date Oct 25, 1994
title Three-Dimensional Structure Of The Platelet Integrin Recognition Segment Of The Fibrinogen Gamma Chain Obtained By Carrier Protein-Driven Crystallization
authors H.Patel, W.F.Anderson
compound source
Molecule: Hen Egg White Lysozyme
Chain: A
Engineered: Yes
Organism_scientific: Gallus Gallus
Organism_common: Chicken
Organism_taxid: 9031
Organ: Egg
Gene: Cdna
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_plasmid: Pned7
symmetry Space Group: P 21 21 21
R_factor 0.202 R_Free 0.328
crystal
cell
length a length b length c angle alpha angle beta angle gamma
55.900 74.000 30.800 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.40 Å
related structures by homologous chain: 1C08, 1JHL
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceThree-dimensional structure of the platelet integrin recognition segment of the fibrinogen gamma chain obtained by carrier protein-driven crystallization., Donahue JP, Patel H, Anderson WF, Hawiger J, Proc Natl Acad Sci U S A 1994 Dec 6;91(25):12178-82. PMID:7527555
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (26 Kb) [Save to disk]
  • Biological Unit Coordinates (1lsg.pdb1.gz) 23 Kb
  • CSU: Contacts of Structural Units for 1LSG
  • Likely Quarternary Molecular Structure file(s) for 1LSG
  • Retrieve 1LSG in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1LSG from S2C, [Save to disk]
  • View 1LSG in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1LSG
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1LSG, from MSDmotif at EBI
  • Genome occurence of 1LSG's fold from GeneCensus
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1lsg_1, region 1-144 [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1lsg_A] [1lsg]
  • SWISS-PROT database: [P00698]
  • Domain organization of [LYSC_CHICK] by SWISSPFAM
  • Domain found in 1LSG: [LYZ1 ] by SMART
  • Other resources with information on 1LSG
  • Community annotation for 1LSG at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Domain movements in 1LSG from the Database of Macromolecular Movements.
  • Images from IMB Jena Image Library of Biological Macromolecules.

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