1LZ4 Hydrolase(O-Glycosyl) date Feb 03, 1993
title Enthalpic Destabilization Of A Mutant Human Lysozyme Lacking Disulfide Bridge Between Cysteine-77 And Cysteine-95
authors K.Inaka, M.Matsushima, R.Kuroki, Y.Taniyama, M.Kikuchi
compound source
Molecule: Human Lysozyme
Chain: A
Ec: 3.2.1.17
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
symmetry Space Group: P 21 21 21
R_factor
R_Free NULL
crystal
cell
length a length b length c angle alpha angle beta angle gamma
56.820 60.860 33.330 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.80 Å
ligand
enzyme Hydrolase E.C.3.2.1.17 BRENDA
related structures by homologous chain: 1BB3
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceEnthalpic destabilization of a mutant human lysozyme lacking a disulfide bridge between cysteine-77 and cysteine-95., Kuroki R, Inaka K, Taniyama Y, Kidokoro S, Matsushima M, Kikuchi M, Yutani K, Biochemistry 1992 Sep 8;31(35):8323-8. PMID:1525170
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (25 Kb) [Save to disk]
  • Biological Unit Coordinates (1lz4.pdb1.gz) 22 Kb
  • CSU: Contacts of Structural Units for 1LZ4
  • Likely Quarternary Molecular Structure file(s) for 1LZ4
  • Retrieve 1LZ4 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1LZ4 from S2C, [Save to disk]
  • View 1LZ4 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1LZ4
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1LZ4, from MSDmotif at EBI
  • Genome occurence of 1LZ4's fold from GeneCensus
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1lz4__, region [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1lz4_A] [1lz4]
  • SWISS-PROT database: [P61626]
  • Domain organization of [LYSC_HUMAN] by SWISSPFAM
  • Domain found in 1LZ4: [LYZ1 ] by SMART
  • Other resources with information on 1LZ4
  • Community annotation for 1LZ4 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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