1M1G Transcription date Jun 19, 2002
title Crystal Structure Of Aquifex Aeolicus N-Utilization Substance G (Nusg), Space Group P2(1)
authors T.Steiner, J.T.Kaiser, S.Marinkovic, R.Huber, M.C.Wahl
compound source
Molecule: Transcription Antitermination Protein Nusg
Chain: A, B, C, D
Engineered: Yes
Organism_scientific: Aquifex Aeolicus
Organism_taxid: 63363
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_vector_type: Plasmid
Expression_system_vector: Pet22b(+)
symmetry Space Group: P 1 21 1
R_factor 0.251 R_Free 0.274
crystal
cell
length a length b length c angle alpha angle beta angle gamma
87.500 54.400 113.200 90.00 89.30 90.00
method X-Ray Diffractionresolution 2.00 Å
related structures by homologous chain: 1NPP, 1NPR
Gene
Ontology
ChainFunctionProcessComponent
A, D, C, B


Primary referenceCrystal structures of transcription factor NusG in light of its nucleic acid- and protein-binding activities., Steiner T, Kaiser JT, Marinkovic S, Huber R, Wahl MC, EMBO J 2002 Sep 2;21(17):4641-53. PMID:12198166
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (184 Kb) [Save to disk]
  • Biological Unit Coordinates (1m1g.pdb1.gz) 45 Kb
  • Biological Unit Coordinates (1m1g.pdb2.gz) 48 Kb
  • Biological Unit Coordinates (1m1g.pdb3.gz) 47 Kb
  • Biological Unit Coordinates (1m1g.pdb4.gz) 45 Kb
  • Biological Unit Coordinates (1m1g.pdb5.gz) 90 Kb
  • Biological Unit Coordinates (1m1g.pdb6.gz) 90 Kb
  • CSU: Contacts of Structural Units for 1M1G
  • Likely Quarternary Molecular Structure file(s) for 1M1G
  • Retrieve 1M1G in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1M1G from S2C, [Save to disk]
  • View 1M1G in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1M1G
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1M1G, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1m1ga2, region A:191-248 [Jmol] [rasmolscript] [script source]
        - Domain d1m1ga1, region A:51-131 [Jmol] [rasmolscript] [script source]
        - Domain d1m1ga3, region A:9-50,A:132-190 [Jmol] [rasmolscript] [script source]
        - Domain d1m1gb2, region B:191-248 [Jmol] [rasmolscript] [script source]
        - Domain d1m1gb1, region B:51-131 [Jmol] [rasmolscript] [script source]
        - Domain d1m1gb3, region B:7-50,B:132-190 [Jmol] [rasmolscript] [script source]
        - Domain d1m1gc2, region C:191-248 [Jmol] [rasmolscript] [script source]
        - Domain d1m1gc3, region C:5-50,C:132-190 [Jmol] [rasmolscript] [script source]
        - Domain d1m1gc1, region C:51-131 [Jmol] [rasmolscript] [script source]
        - Domain d1m1gd3, region D:10-50,D:132-190 [Jmol] [rasmolscript] [script source]
        - Domain d1m1gd2, region D:191-248 [Jmol] [rasmolscript] [script source]
        - Domain d1m1gd1, region D:51-131 [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1m1g] [1m1g_A] [1m1g_B] [1m1g_D] [1m1g_C]
  • SWISS-PROT database: [O67757]
  • Domain organization of [NUSG_AQUAE] by SWISSPFAM
  • Domains found in 1M1G: [KOW] [NGN ] by SMART
  • Other resources with information on 1M1G
  • Community annotation for 1M1G at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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