1MFR	Iron Storage	date	Jun 18, 1998
title	Crystal Structure Of M Ferritin
authors	Y.Ha, D.Shi, N.M.Allewell
compound		source
Molecule: M Ferritin Chain: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R V, W, X; Engineered: Yes		Organism_scientific: Rana Catesbeiana Organism_common: Bullfrog Organism_taxid: 8400 Expression_system: Escherichia Coli Expression_system_taxid: 562
symmetry	Space Group: P 31 2 1	R_factor 0.190 R_Free 0.194
crystal cell	length a length b length c angle alpha angle beta angle gamma 210.800 210.800 328.100 90.00 90.00 120.00
method	X-Ray Diffraction	resolution	2.80 Å
ligand	MG	enzyme
related structures	by homologous chain: 1FHA
Gene Ontology	Chain Function Process Component S, F, T, N, K, E, V, Q, M, C, L, A, J, O, W, X, P, B, H, D, R, I, G, U
Primary reference	Crystal structure of bullfrog M ferritin at 2.8 A resolution: analysis of subunit interactions and the binuclear metal center., Ha Y, Shi D, Small GW, Theil EC, Allewell NM, J Biol Inorg Chem 1999 Jun;4(3):243-56. PMID:10439069

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (680 Kb) [Save to disk] Biological Unit Coordinates (1mfr.pdb1.gz) 671 Kb LPC: Ligand-Protein Contacts for 1MFR CSU: Contacts of Structural Units for 1MFR Likely Quarternary Molecular Structure file(s) for 1MFR Retrieve 1MFR in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 1MFR from S2C, [Save to disk]

View 1MFR in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 1MFR

Ramachandran plot from PDBSum

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 1MFR, from MSDmotif at EBI Classification of representative domains in scop (Structural Classification of Proteins)     - Domain d1mfra_, region A [Jmol] [rasmolscript] [script source]     - Domain d1mfrb_, region B [Jmol] [rasmolscript] [script source]     - Domain d1mfrc_, region C [Jmol] [rasmolscript] [script source]     - Domain d1mfrd_, region D [Jmol] [rasmolscript] [script source]     - Domain d1mfre_, region E [Jmol] [rasmolscript] [script source]     - Domain d1mfrf_, region F [Jmol] [rasmolscript] [script source]     - Domain d1mfrg_, region G [Jmol] [rasmolscript] [script source]     - Domain d1mfrh_, region H [Jmol] [rasmolscript] [script source]     - Domain d1mfri_, region I [Jmol] [rasmolscript] [script source]     - Domain d1mfrj_, region J [Jmol] [rasmolscript] [script source]     - Domain d1mfrk_, region K [Jmol] [rasmolscript] [script source]     - Domain d1mfrl_, region L [Jmol] [rasmolscript] [script source]     - Domain d1mfrm_, region M [Jmol] [rasmolscript] [script source]     - Domain d1mfrn_, region N [Jmol] [rasmolscript] [script source]     - Domain d1mfro_, region O [Jmol] [rasmolscript] [script source]     - Domain d1mfrp_, region P [Jmol] [rasmolscript] [script source]     - Domain d1mfrq_, region Q [Jmol] [rasmolscript] [script source]     - Domain d1mfrr_, region R [Jmol] [rasmolscript] [script source]     - Domain d1mfrs_, region S [Jmol] [rasmolscript] [script source]     - Domain d1mfrt_, region T [Jmol] [rasmolscript] [script source]     - Domain d1mfru_, region U [Jmol] [rasmolscript] [script source]     - Domain d1mfrv_, region V [Jmol] [rasmolscript] [script source]     - Domain d1mfrw_, region W [Jmol] [rasmolscript] [script source]     - Domain d1mfrx_, region X [Jmol] [rasmolscript] [script source] Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH Summaries and structural analyses of PDB data files from PDBSum Identification of Protein Pockets & Cavities at CASTp

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1mfr_F] [1mfr_X] [1mfr_G] [1mfr_R] [1mfr_O] [1mfr_S] [1mfr_L] [1mfr_W] [1mfr_I] [1mfr_H] [1mfr_U] [1mfr_C] [1mfr_D] [1mfr_M] [1mfr_K] [1mfr_B] [1mfr_N] [1mfr_Q] [1mfr_A] [1mfr_J] [1mfr_P] [1mfr_E] [1mfr_T] [1mfr_V] [1mfr] SWISS-PROT database: [P07798] Domain organization of [FRI2_RANCA] by SWISSPFAM

Other resources with information on 1MFR

Community annotation for 1MFR at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

Movements, Movies and Images

Images from IMB Jena Image Library of Biological Macromolecules.

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