1MG0 Oxidoreductase date Aug 14, 2002
title Horse Liver Alcohol Dehydrogenase Complexed With Nad+ And 2, Difluorobenzyl Alcohol
authors J.K.Rubach, B.V.Plapp
compound source
Molecule: Alcohol Dehydrogenase E Chain
Chain: A, B, C, D
Ec: 1.1.1.1
 Organism_scientific: Equus Caballus
Organism_common: Horse
Organism_taxid: 9796
Organ: Liver
symmetry Space Group: P 1 21 1
R_factor 0.179 R_Free 0.214
crystal
cell
length a length b length c angle alpha angle beta angle gamma
50.114 180.310 86.912 90.00 105.99 90.00
method X-Ray Diffractionresolution 1.80 Å
ligand DFB, NAD, ZN enzyme Oxidoreductase E.C.1.1.1.1 BRENDA
related structures by homologous chain: 1HF3, 1QV7
Gene
Ontology
ChainFunctionProcessComponent
A, D, C, B


Primary referenceMobility of fluorobenzyl alcohols bound to liver alcohol dehydrogenases as determined by NMR and X-ray crystallographic studies., Rubach JK, Plapp BV, Biochemistry 2002 Dec 31;41(52):15770-9. PMID:12501206
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (247 Kb) [Save to disk]
  • Biological Unit Coordinates (1mg0.pdb1.gz) 122 Kb
  • Biological Unit Coordinates (1mg0.pdb2.gz) 124 Kb
  • LPC: Ligand-Protein Contacts for 1MG0
  • CSU: Contacts of Structural Units for 1MG0
  • Likely Quarternary Molecular Structure file(s) for 1MG0
  • Structure Factors (1864 Kb)
  • Retrieve 1MG0 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1MG0 from S2C, [Save to disk]
  • Re-refined 1mg0 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 1MG0 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 1MG0
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1MG0, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1mg0a1, region A:1-163,A:340-374 [Jmol] [rasmolscript] [script source]
        - Domain d1mg0a2, region A:164-339 [Jmol] [rasmolscript] [script source]
        - Domain d1mg0b1, region B:1-163,B:340-374 [Jmol] [rasmolscript] [script source]
        - Domain d1mg0b2, region B:164-339 [Jmol] [rasmolscript] [script source]
        - Domain d1mg0c1, region C:1-163,C:340-374 [Jmol] [rasmolscript] [script source]
        - Domain d1mg0c2, region C:164-339 [Jmol] [rasmolscript] [script source]
        - Domain d1mg0d1, region D:1-163,D:340-374 [Jmol] [rasmolscript] [script source]
        - Domain d1mg0d2, region D:164-339 [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1mg0_A] [1mg0] [1mg0_C] [1mg0_B] [1mg0_D]
  • SWISS-PROT database: [P00327]
  • Domain organization of [ADH1E_HORSE] by SWISSPFAM
    • Other resources with information on 1MG0
  • Community annotation for 1MG0 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

    • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022
    Bioinformatics Unit
    Weizmann Institute of Science