1MMC Chitin-Binding date Oct 25, 1995
title 1h Nmr Study Of The Solution Structure Of Ac-Amp2
authors J.C.Martins, D.Maes, R.Loris, H.A.M.Pepermans, L.Wyns, R.Willem, P.Verheyden
compound source
Molecule: Antimicrobial Peptide 2
Chain: A
Synonym: Ac-Amp2
 Organism_scientific: Amaranthus Caudatus
Organism_common: Amaranth
Organism_taxid: 3567
Tissue: Seed
methodSolution NMR
related structures by homologous chain: 1P9Z
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceH NMR study of the solution structure of Ac-AMP2, a sugar binding antimicrobial protein isolated from Amaranthus caudatus., Martins JC, Maes D, Loris R, Pepermans HA, Wyns L, Willem R, Verheyden P, J Mol Biol 1996 May 3;258(2):322-33. PMID:8627629
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (185 Kb) [Save to disk]
  • Biological Unit Coordinates (1mmc.pdb1.gz) 8 Kb
  • CSU: Contacts of Structural Units for 1MMC
  • Original NMR restraints for 1MMC from PDB
  • Retrieve 1MMC in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1MMC from S2C, [Save to disk]
    • View 1MMC in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 1MMC
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1MMC, from MSDmotif at EBI
  • Genome occurence of 1MMC's fold from GeneCensus
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1mmc__, region [Jmol] [rasmolscript] [script source]
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1mmc] [1mmc_A]
  • SWISS-PROT database: [P27275]
  • Domain organization of [AMP_AMACA] by SWISSPFAM
  • Domain found in 1MMC: [ChtBD1 ] by SMART
    • Other resources with information on 1MMC
  • Community annotation for 1MMC at PDBWiki (http://pdbwiki.org)
  • NMR Ensemble (OLDERADO: core, domain and representative structure database)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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