1MUN Dna Repair date Aug 26, 1998
title Catalytic Domain Of Muty From Escherichia Coli D138n Mutant
authors Y.Guan, J.A.Tainer
compound source
Molecule: Adenine Glycosylase
Chain: A
Fragment: Catalytic Domain
Ec: 3.2.2.-
Engineered: Yes
Mutation: Yes
Organism_scientific: Escherichia Coli
Organism_taxid: 562
symmetry Space Group: C 1 2 1
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
82.500 49.000 69.400 90.00 122.90 90.00
method X-Ray Diffractionresolution 1.20 Å
ligand GOL, IMD, SF4 enzyme Hydrolase E.C.3.2.2 BRENDA
note 1MUN is a representative structure
related structures by homologous chain: 1KG2
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceMutY catalytic core, mutant and bound adenine structures define specificity for DNA repair enzyme superfamily., Guan Y, Manuel RC, Arvai AS, Parikh SS, Mol CD, Miller JH, Lloyd S, Tainer JA, Nat Struct Biol 1998 Dec;5(12):1058-64. PMID:9846876
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (48 Kb) [Save to disk]
  • Biological Unit Coordinates (1mun.pdb1.gz) 85 Kb
  • LPC: Ligand-Protein Contacts for 1MUN
  • CSU: Contacts of Structural Units for 1MUN
  • Likely Quarternary Molecular Structure file(s) for 1MUN
  • Retrieve 1MUN in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1MUN from S2C, [Save to disk]
  • View 1MUN in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1MUN
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Conformational Epitope Prediction for 1MUN from the CEP Server.
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1MUN, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1mun__, region [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1mun] [1mun_A]
  • SWISS-PROT database: [P17802]
  • Domain organization of [MUTY_ECOLI] by SWISSPFAM
  • Domains found in 1MUN: [ENDO3c] [FES] [HhH1 ] by SMART
  • Other resources with information on 1MUN
  • Community annotation for 1MUN at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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