1N0Q Structural Protein date Oct 14, 2002
title 3ank: A Designed Ankyrin Repeat Protein With Three Identical Repeats
authors L.K.Mosavi, D.L.Minor Jr., Z.Y.Peng
compound source
Molecule: 3 Ankyrin Repeats
Chain: A, B
Synonym: 3ank
Engineered: Yes
Gene: Designed Consensus Ankyrin Repeat
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Bl21(De3)Plyss
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Paed4
symmetry Space Group: P 21 21 21
R_factor 0.171 R_Free 0.187
crystal
cell
length a length b length c angle alpha angle beta angle gamma
39.636 43.159 105.574 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.26 Å
ligand TFA enzyme
note 1N0Q is a representative structure
related structures by homologous chain: 1N0R
Primary referenceConsensus-derived structural determinants of the ankyrin repeat motif., Mosavi LK, Minor DL Jr, Peng ZY, Proc Natl Acad Sci U S A 2002 Dec 10;99(25):16029-34. Epub 2002 Dec 2. PMID:12461176
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (36 Kb) [Save to disk]
  • Biological Unit Coordinates (1n0q.pdb1.gz) 31 Kb
  • LPC: Ligand-Protein Contacts for 1N0Q
  • CSU: Contacts of Structural Units for 1N0Q
  • Likely Quarternary Molecular Structure file(s) for 1N0Q
  • Structure Factors (318 Kb)
  • Retrieve 1N0Q in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1N0Q from S2C, [Save to disk]
  • Re-refined 1n0q structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 1N0Q in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1N0Q
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Conformational Epitope Prediction for 1N0Q 1N0QA 1N0QB from the CEP Server.
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1N0Q, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1n0qa_, region A [Jmol] [rasmolscript] [script source]
        - Domain d1n0qb_, region B [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1n0q_A] [1n0q] [1n0q_B]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 1N0Q: [ANK ] by SMART
  • Other resources with information on 1N0Q
  • Community annotation for 1N0Q at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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