1N4E Crystal Structure of a DNA Decamer Containing a Thymine-dimer date
authors Park, H., Zhang, K., Ren, Y., Nadji, S., Sinha, N., Taylor, J.S., Kang, C.
compound source
symmetry
R_factor
R_Free 0.255
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 2.50
note 1N4E (Molecule of the Month:pdb91)
Primary referenceCrystal structure of a DNA decamer containing a cis-syn thymine dimer., Park H, Zhang K, Ren Y, Nadji S, Sinha N, Taylor JS, Kang C, Proc Natl Acad Sci U S A. 2002 Dec 10;99(25):15965-70. Epub 2002 Nov 27. PMID:12456887
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (21 Kb) [Save to disk]
  • Biological Unit Coordinates (1n4e.pdb1.gz) 9 Kb
  • Biological Unit Coordinates (1n4e.pdb2.gz) 8 Kb
  • CSU: Contacts of Structural Units for 1N4E
  • Likely Quarternary Molecular Structure file(s) for 1N4E
  • Retrieve 1N4E in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1N4E from S2C, [Save to disk]
    • View 1N4E in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 1N4E
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1N4E, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1n4e_C] [1n4e_B] [1n4e_D] [1n4e] [1n4e_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 1N4E
  • Community annotation for 1N4E at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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