1ORC Gene Regulating Protein date Oct 30, 1995
title Cro Repressor Insertion Mutant K56-[Dgevk]
authors R.A.Albright, M.C.Mossing, B.W.Matthews
compound source
Molecule: Cro Repressor Insertion Mutant K56-[Dgevk]
Chain: A
Engineered: Yes
Mutation: Yes
Other_details: Results In A 71-Residue Stable "Monomer" Mut
Organism_scientific: Enterobacteria Phage Lambda
Organism_taxid: 10710
Gene: Cro Mutant K56-[Dgevk]
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_gene: Cro Mutant K56-[Dgevk]
symmetry Space Group: P 21 21 21
R_factor 0.178 R_Free NULL
crystal
cell
length a length b length c angle alpha angle beta angle gamma
34.770 39.170 48.310 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.54 Å
related structures by homologous chain: 1D1M
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceHigh-resolution structure of an engineered Cro monomer shows changes in conformation relative to the native dimer., Albright RA, Mossing MC, Matthews BW, Biochemistry 1996 Jan 23;35(3):735-42. PMID:8547253
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (15 Kb) [Save to disk]
  • Biological Unit Coordinates (1orc.pdb1.gz) 12 Kb
  • CSU: Contacts of Structural Units for 1ORC
  • Likely Quarternary Molecular Structure file(s) for 1ORC
  • Structure Factors (76 Kb)
  • Retrieve 1ORC in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1ORC from S2C, [Save to disk]
  • Re-refined 1orc structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 1ORC in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1ORC
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1ORC, from MSDmotif at EBI
  • Genome occurence of 1ORC's fold from GeneCensus
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1orc__, region [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1orc_A] [1orc]
  • SWISS-PROT database: [P03040]
  • Domain organization of [RCRO_LAMBD] by SWISSPFAM
  • Other resources with information on 1ORC
  • Community annotation for 1ORC at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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