1OVH	Hydrolase	date	Mar 26, 2003
title	T4 Lysozyme Cavity Mutant L99am102q Bound With 2-Chloro-6-M Aniline
authors	B.Q.Wei, W.A.Baase, L.H.Weaver, B.W.Matthews, B.K.Shoichet
compound		source
Molecule: Lysozyme Chain: A Synonym: Lysis Protein, Muramidase, Endolysin Ec: 3.2.1.17 Engineered: Yes Mutation: Yes		Organism_scientific: Enterobacteria Phage T4 Organism_taxid: 10665 Expression_system: Escherichia Coli Expression_system_taxid: 562
symmetry	Space Group: P 32 2 1	R_factor R_Free NULL
crystal cell	length a length b length c angle alpha angle beta angle gamma 60.700 60.700 97.200 90.00 90.00 120.00
method	X-Ray Diffraction	resolution	1.95 Å
ligand	2CM, BME, CL	enzyme	Hydrolase E.C.3.2.1.17 BRENDA
related structures	by homologous chain: 1KY0, 200L
Gene Ontology	Chain Function Process Component A
Primary reference	Testing a flexible-receptor docking algorithm in a model binding site., Wei BQ, Weaver LH, Ferrari AM, Matthews BW, Shoichet BK, J Mol Biol 2004 Apr 9;337(5):1161-82. PMID:15046985

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (32 Kb) [Save to disk] Biological Unit Coordinates (1ovh.pdb1.gz) 28 Kb LPC: Ligand-Protein Contacts for 1OVH CSU: Contacts of Structural Units for 1OVH Likely Quarternary Molecular Structure file(s) for 1OVH Structure Factors (106 Kb) Retrieve 1OVH in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 1OVH from S2C, [Save to disk] Re-refined 1ovh structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 1OVH in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 1OVH

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 1OVH, from MSDmotif at EBI Classification of representative domains in scop (Structural Classification of Proteins)     - Domain d1ovha_, region A [Jmol] [rasmolscript] [script source] Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH Summaries and structural analyses of PDB data files from PDBSum Identification of Protein Pockets & Cavities at CASTp

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1ovh] [1ovh_A] SWISS-PROT database: [P00720] Domain organization of [LYS_BPT4] by SWISSPFAM

Other resources with information on 1OVH

Community annotation for 1OVH at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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Images from IMB Jena Image Library of Biological Macromolecules.

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