1OWM	Lyase	date	Mar 28, 2003
title	Data1:Dna Photolyase Received X-Rays Dose 1.2 Exp15 Photon
authors	H.Komori, S.Adachi, K.Miki, A.Eker, R.Kort
compound		source
Molecule: Deoxyribodipyrimidine Photolyase Chain: A Synonym: Photolyase Ec: 4.1.99.3 Engineered: Yes		Organism_scientific: Synechococcus Elongatus Organism_taxid: 269084 Strain: Pcc 6301 Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_vector_type: Plasmid Expression_system_plasmid: Pet3a
symmetry	Space Group: P 43 21 2	R_factor 0.211 R_Free 0.263
crystal cell	length a length b length c angle alpha angle beta angle gamma 89.329 89.329 133.403 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	2.30 Å
ligand	FAD, PO4	enzyme	Lyase E.C.4.1.99.3 BRENDA
related structures	by homologous chain: 1OWN, 1OWP
Gene Ontology	Chain Function Process Component A
Primary reference	DNA apophotolyase from Anacystis nidulans: 1.8 A structure, 8-HDF reconstitution and X-ray-induced FAD reduction., Kort R, Komori H, Adachi S, Miki K, Eker A, Acta Crystallogr D Biol Crystallogr 2004 Jul;60(Pt 7):1205-13. Epub 2004, Jun 22. PMID:15213381

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (85 Kb) [Save to disk] Biological Unit Coordinates (1owm.pdb1.gz) 81 Kb LPC: Ligand-Protein Contacts for 1OWM CSU: Contacts of Structural Units for 1OWM Likely Quarternary Molecular Structure file(s) for 1OWM Structure Factors (212 Kb) Retrieve 1OWM in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 1OWM from S2C, [Save to disk] Re-refined 1owm structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 1OWM in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 1OWM

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 1OWM, from MSDmotif at EBI Classification of representative domains in scop (Structural Classification of Proteins)     - Domain d1owma2, region A:2-204 [Jmol] [rasmolscript] [script source]     - Domain d1owma1, region A:205-475 [Jmol] [rasmolscript] [script source]

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1owm] [1owm_A] SWISS-PROT database: [P05327] Domain organization of [PHR_SYNP6] by SWISSPFAM

Other resources with information on 1OWM

Community annotation for 1OWM at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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Images from IMB Jena Image Library of Biological Macromolecules.

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