1P15	Hydrolase	date	Apr 11, 2003
title	Crystal Structure Of The D2 Domain Of Rptpa
authors	E.D.Sonnenburg, A.Bilwes, T.Hunter, J.P.Noel
compound		source
Molecule: Protein-Tyrosine Phosphatase Alpha Chain: A, B Fragment: D2 Domain Synonym: R-Ptp- Alpha, Lca-Related Phosphatase Ec: 3.1.3.48 Engineered: Yes		Organism_scientific: Mus Musculus Organism_common: House Mouse Organism_taxid: 10090 Gene: Ptpra Or Lrp Or Ptpa Expression_system: Escherichia Coli Expression_system_taxid: 562
symmetry	Space Group: P 31	R_factor 0.203 R_Free 0.255
crystal cell	length a length b length c angle alpha angle beta angle gamma 59.101 59.101 152.657 90.00 90.00 120.00
method	X-Ray Diffraction	resolution	2.00 Å
ligand		enzyme	Hydrolase E.C.3.1.3.48 BRENDA
Gene Ontology	Chain Function Process Component A, B
Primary reference	The structure of the membrane distal phosphatase domain of RPTPalpha reveals interdomain flexibility and an SH2 domain interaction region., Sonnenburg ED, Bilwes A, Hunter T, Noel JP, Biochemistry 2003 Jul 8;42(26):7904-14. PMID:12834342

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (86 Kb) [Save to disk] Biological Unit Coordinates (1p15.pdb1.gz) 41 Kb Biological Unit Coordinates (1p15.pdb2.gz) 41 Kb CSU: Contacts of Structural Units for 1P15 Likely Quarternary Molecular Structure file(s) for 1P15 Structure Factors (281 Kb) Retrieve 1P15 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 1P15 from S2C, [Save to disk] Re-refined 1p15 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 1P15 in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 1P15

Ramachandran plot from PDBSum

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 1P15, from MSDmotif at EBI Classification of representative domains in scop (Structural Classification of Proteins)     - Domain d1p15a_, region A [Jmol] [rasmolscript] [script source]     - Domain d1p15b_, region B [Jmol] [rasmolscript] [script source] Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH Summaries and structural analyses of PDB data files from PDBSum Identification of Protein Pockets & Cavities at CASTp

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1p15_A] [1p15] [1p15_B] SWISS-PROT database: [P18052] Domain organization of [PTPRA_MOUSE] by SWISSPFAM Domain found in 1P15: [PTPc ] by SMART

Other resources with information on 1P15

Community annotation for 1P15 at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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