1PAV Structural Genomics date May 14, 2003
title Solution Nmr Structure Of Hypothetical Protein Ta1414 Of The Acidophilum
authors D.Monleon, A.Yee, C.S.Liu, C.Arrowsmith, B.Celda
compound source
Molecule: Hypothetical Protein Ta1170ta1414
Chain: A
Engineered: Yes
Organism_scientific: Thermoplasma Acidophilum
Organism_taxid: 2303
Gene: Ta1170 And Ta1414
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet15b
methodSolution NMR
Primary referenceSolution structure of hypothetical protein TA1414 from Thermoplasma acidophilum., Monleon D, Yee A, Liu CS, Arrowsmith C, Celda B, J Biomol NMR 2004 Jan;28(1):81-4. PMID:14739641
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (191 Kb) [Save to disk]
  • Biological Unit Coordinates (1pav.pdb1.gz) 19 Kb
  • CSU: Contacts of Structural Units for 1PAV
  • Original NMR restraints for 1PAV from PDB
  • Retrieve 1PAV in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1PAV from S2C, [Save to disk]
  • View 1PAV in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1PAV
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1PAV, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1pava_, region A [Jmol] [rasmolscript] [script source]
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1pav] [1pav_A]
  • SWISS-PROT database: [Q9HI35]
  • Domain organization of [Y1170_THEAC] by SWISSPFAM
  • Other resources with information on 1PAV
  • Community annotation for 1PAV at PDBWiki (http://pdbwiki.org)
  • NMR Ensemble (OLDERADO: core, domain and representative structure database)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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