1PCL Lyase (Acting On Polysaccharides) date Nov 05, 1993
title Unusual Structural Features In The Parallel Beta-Helix In Pe Lyases
authors S.E.Lietzke, N.T.Keen, F.Jurnak
compound source
Molecule: Pectate Lyase E
Chain: A
Ec: 4.2.2.2
Engineered: Yes
Organism_scientific: Erwinia Chrysanthemi
Organism_taxid: 556
Gene: Ppel748 Of Pelc
symmetry Space Group: P 21 21 21
R_factor 0.206 R_Free NULL
crystal
cell
length a length b length c angle alpha angle beta angle gamma
38.790 91.140 102.990 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.20 Å
ligand
enzyme Lyase E.C.4.2.2.2 BRENDA
related structures by homologous chain: 1OOC
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceUnusual structural features in the parallel beta-helix in pectate lyases., Yoder MD, Lietzke SE, Jurnak F, Structure 1993 Dec 15;1(4):241-51. PMID:8081738
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (11 Kb) [Save to disk]
  • Biological Unit Coordinates (1pcl.pdb1.gz) 9 Kb
  • CSU: Contacts of Structural Units for 1PCL
  • Likely Quarternary Molecular Structure file(s) for 1PCL
  • Retrieve 1PCL in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1PCL from S2C, [Save to disk]
  • View 1PCL in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1PCL
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1PCL, from MSDmotif at EBI
  • Genome occurence of 1PCL's fold from GeneCensus
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1pcl__, region [Jmol] [rasmolscript] [script source]
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1pcl] [1pcl_A]
  • SWISS-PROT database: [P04960]
  • Domain organization of [PELE1_ERWCH] by SWISSPFAM
  • Domain found in 1PCL: [Amb_all ] by SMART
  • Other resources with information on 1PCL
  • Community annotation for 1PCL at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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