1PRY	Transferase	date	Jun 20, 2003
title	Structure Determination Of Fibrillarin Homologue From Hyperthermophilic Archaeon Pyrococcus Furiosus (Pfu-65527)
authors	L.Deng, N.G.Starostina, Z.J.Liu, J.P.Rose, R.M.Terns, M.P.Terns, C.Wang, Southeast Collaboratory For Structural Genomics (Sec
compound		source
Molecule: Fibrillarin-Like Pre-Rrna Processing Protein Chain: A Engineered: Yes		Organism_scientific: Pyrococcus Furiosus Organism_taxid: 2261 Gene: Flpa Or Pf0059 Expression_system: Escherichia Coli Bl21 Expression_system_taxid: 511693 Expression_system_strain: Bl21 Expression_system_vector_type: Plasmid Expression_system_plasmid: Pet-21b(+)
symmetry	Space Group: P 21 21 21	R_factor 0.204 R_Free 0.259
crystal cell	length a length b length c angle alpha angle beta angle gamma 43.967 62.082 103.363 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	1.97 Å
related structures	by homologous chain: 1G8A
Gene Ontology	Chain Function Process Component A
Primary reference	Structure determination of fibrillarin from the hyperthermophilic archaeon Pyrococcus furiosus., Deng L, Starostina NG, Liu ZJ, Rose JP, Terns RM, Terns MP, Wang BC, Biochem Biophys Res Commun 2004 Mar 12;315(3):726-32. PMID:14975761

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (44 Kb) [Save to disk] Biological Unit Coordinates (1pry.pdb1.gz) 40 Kb CSU: Contacts of Structural Units for 1PRY Likely Quarternary Molecular Structure file(s) for 1PRY Structure Factors (274 Kb) Retrieve 1PRY in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 1PRY from S2C, [Save to disk] Re-refined 1pry structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 1PRY in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 1PRY

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 1PRY, from MSDmotif at EBI Classification of representative domains in scop (Structural Classification of Proteins)     - Domain d1prya_, region A [Jmol] [rasmolscript] [script source]

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1pry] [1pry_A] SWISS-PROT database: [Q8U4M2] Domain organization of [FLPA_PYRFU] by SWISSPFAM Domain found in 1PRY: [Fibrillarin ] by SMART

Other resources with information on 1PRY

Community annotation for 1PRY at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

Movements, Movies and Images

Images from IMB Jena Image Library of Biological Macromolecules.

You may enter another PDB ID code

Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]

---

OCA© by Jaime Prilusky, 1996-2014,2022 Bioinformatics Unit Weizmann Institute of Science

---