1QOW Antibiotic date Nov 19, 1999
title Mersacidin From Bacillus
authors T.R.Schneider, J.Kaercher, G.M.Sheldrick
compound source
Molecule: Mersacidin
Chain: A, B, C, D, E, F
 Organism_scientific: Bacillus Sp.
Organism_taxid: 1409
Strain: Hil Y-85, 54728
symmetry Space Group: P 32
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
46.090 46.090 31.020 90.00 90.00 120.00
method X-Ray Diffractionresolution 1.06 Å
ligand DBB, DHA, MOH, TEE enzyme
Primary referenceAb initio structure determination of the lantibiotic mersacidin., Schneider TR, Karcher J, Pohl E, Lubini P, Sheldrick GM, Acta Crystallogr D Biol Crystallogr 2000 Jun;56 ( Pt 6):705-13. PMID:10818347
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (43 Kb) [Save to disk]
  • Biological Unit Coordinates (1qow.pdb1.gz) 36 Kb
  • LPC: Ligand-Protein Contacts for 1QOW
  • CSU: Contacts of Structural Units for 1QOW
  • Likely Quarternary Molecular Structure file(s) for 1QOW
  • Structure Factors (288 Kb)
  • Retrieve 1QOW in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1QOW from S2C, [Save to disk]
  • Re-refined 1qow structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 1QOW in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 1QOW
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Conformational Epitope Prediction for 1QOW 1QOWA 1QOWB 1QOWC 1QOWD 1QOWE 1QOWF from the CEP Server.
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1QOW, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1qowa_, region A [Jmol] [rasmolscript] [script source]
        - Domain d1qowb_, region B [Jmol] [rasmolscript] [script source]
        - Domain d1qowc_, region C [Jmol] [rasmolscript] [script source]
        - Domain d1qowd_, region D [Jmol] [rasmolscript] [script source]
        - Domain d1qowe_, region E [Jmol] [rasmolscript] [script source]
        - Domain d1qowf_, region F [Jmol] [rasmolscript] [script source]
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1qow] [1qow_C] [1qow_A] [1qow_D] [1qow_E] [1qow_B] [1qow_F]
  • SWISS-PROT database: [P43683]
  • Domain organization of [MRSA_BACSY] by SWISSPFAM
    • Other resources with information on 1QOW
  • Community annotation for 1QOW at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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