1QOX	Hydrolase	date	Nov 24, 1999
title	Beta-Glucosidase From Bacillus Circulans Sp. Alkalophilus
authors	N.Hakulinen, J.Rouvinen
compound		source
Molecule: Beta-Glucosidase Chain: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P Ec: 3.2.1.21		Organism_scientific: Bacillus Circulans Organism_taxid: 44160 Strain: Alkalophilus
symmetry	Space Group: P 1	R_factor 0.255 R_Free NULL
crystal cell	length a length b length c angle alpha angle beta angle gamma 116.400 122.300 163.200 89.30 74.30 68.00
method	X-Ray Diffraction	resolution	2.70 Å
ligand		enzyme	Hydrolase E.C.3.2.1.21 BRENDA
related structures	by homologous chain: 1BGA
Gene Ontology	Chain Function Process Component F, N, K, E, M, C, L, A, J, O, P, B, H, D, I, G
Primary reference	The crystal structure of beta-glucosidase from Bacillus circulans sp. alkalophilus: ability to form long polymeric assemblies., Hakulinen N, Paavilainen S, Korpela T, Rouvinen J, J Struct Biol 2000 Feb;129(1):69-79. PMID:10675298

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (1183 Kb) [Save to disk] Biological Unit Coordinates (1qox.pdb1.gz) 595 Kb Biological Unit Coordinates (1qox.pdb2.gz) 596 Kb CSU: Contacts of Structural Units for 1QOX Likely Quarternary Molecular Structure file(s) for 1QOX Structure Factors (1642 Kb) Retrieve 1QOX in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 1QOX from S2C, [Save to disk] Re-refined 1qox structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 1QOX in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 1QOX

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 1QOX, from MSDmotif at EBI Classification of representative domains in scop (Structural Classification of Proteins)     - Domain d1qoxa_, region A [Jmol] [rasmolscript] [script source]     - Domain d1qoxb_, region B [Jmol] [rasmolscript] [script source]     - Domain d1qoxc_, region C [Jmol] [rasmolscript] [script source]     - Domain d1qoxd_, region D [Jmol] [rasmolscript] [script source]     - Domain d1qoxe_, region E [Jmol] [rasmolscript] [script source]     - Domain d1qoxf_, region F [Jmol] [rasmolscript] [script source]     - Domain d1qoxg_, region G [Jmol] [rasmolscript] [script source]     - Domain d1qoxh_, region H [Jmol] [rasmolscript] [script source]     - Domain d1qoxi_, region I [Jmol] [rasmolscript] [script source]     - Domain d1qoxj_, region J [Jmol] [rasmolscript] [script source]     - Domain d1qoxk_, region K [Jmol] [rasmolscript] [script source]     - Domain d1qoxl_, region L [Jmol] [rasmolscript] [script source]     - Domain d1qoxm_, region M [Jmol] [rasmolscript] [script source]     - Domain d1qoxn_, region N [Jmol] [rasmolscript] [script source]     - Domain d1qoxo_, region O [Jmol] [rasmolscript] [script source]     - Domain d1qoxp_, region P [Jmol] [rasmolscript] [script source] Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH Summaries and structural analyses of PDB data files from PDBSum Identification of Protein Pockets & Cavities at CASTp

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1qox_B] [1qox_L] [1qox_C] [1qox_M] [1qox_I] [1qox_G] [1qox_F] [1qox_H] [1qox_E] [1qox] [1qox_P] [1qox_D] [1qox_O] [1qox_A] [1qox_K] [1qox_N] [1qox_J] SWISS-PROT database: [Q03506] Domain organization of [BGLA_BACCI] by SWISSPFAM

Other resources with information on 1QOX

Community annotation for 1QOX at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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