1QU0 Metal Binding Protein date Jul 05, 1999
title Crystal Structure Of The Fifth Laminin G-Like Module Of The Mouse Laminin Alpha2 Chain
authors E.Hohenester, D.Tisi, J.F.Talts, R.Timpl
compound source
Molecule: Laminin Alpha2 Chain
Chain: A, B, C, D
Fragment: Lg5 Module
Engineered: Yes
Mutation: Yes
 Organism_scientific: Mus Musculus
Organism_common: House Mouse
Organism_taxid: 10090
Expression_system_common: 293-Ebna Human Ambryonic Kidney Cells
symmetry Space Group: P 1 21 1
R_factor 0.229 R_Free 0.255
crystal
cell
length a length b length c angle alpha angle beta angle gamma
42.220 112.890 117.400 90.00 92.00 90.00
method X-Ray Diffractionresolution 2.35 Å
ligand CA, SO4 enzyme
related structures by homologous chain: 1DYK
Primary referenceThe crystal structure of a laminin G-like module reveals the molecular basis of alpha-dystroglycan binding to laminins, perlecan, and agrin., Hohenester E, Tisi D, Talts JF, Timpl R, Mol Cell 1999 Nov;4(5):783-92. PMID:10619025
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (122 Kb) [Save to disk]
  • Biological Unit Coordinates (1qu0.pdb1.gz) 60 Kb
  • Biological Unit Coordinates (1qu0.pdb2.gz) 60 Kb
  • Biological Unit Coordinates (1qu0.pdb3.gz) 61 Kb
  • Biological Unit Coordinates (1qu0.pdb4.gz) 32 Kb
  • LPC: Ligand-Protein Contacts for 1QU0
  • CSU: Contacts of Structural Units for 1QU0
  • Likely Quarternary Molecular Structure file(s) for 1QU0
  • Structure Factors (314 Kb)
  • Retrieve 1QU0 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1QU0 from S2C, [Save to disk]
  • Re-refined 1qu0 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 1QU0 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 1QU0
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1QU0, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1qu0a_, region A [Jmol] [rasmolscript] [script source]
        - Domain d1qu0b_, region B [Jmol] [rasmolscript] [script source]
        - Domain d1qu0c_, region C [Jmol] [rasmolscript] [script source]
        - Domain d1qu0d_, region D [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1qu0_A] [1qu0_C] [1qu0_D] [1qu0_B] [1qu0]
  • SWISS-PROT database: [Q60675]
  • Domain organization of [LAMA2_MOUSE] by SWISSPFAM
  • Domain found in 1QU0: [LamG ] by SMART
    • Other resources with information on 1QU0
  • Community annotation for 1QU0 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

    • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022
    Bioinformatics Unit
    Weizmann Institute of Science