1QUT Hydrolase date Jul 03, 1999
title The Soluble Lytic Transglycosylase Slt35 From Escherichia Co Complex With N-Acetylglucosamine
authors E.J.Van Asselt, A.J.Dijkstra, K.H.Kalk, B.Takacs, W.Keck, B.W.Dij
compound source
Molecule: Lytic Murein Transglycosylase B
Chain: A
Fragment: Slt35
Synonym: Murein Hydrolase B, 35 Kd Soluble Lytic Transglyco Slt35;
Ec: 3.2.1.-
Engineered: Yes
Mutation: Yes
Organism_scientific: Escherichia Coli
Organism_taxid: 562
Cellular_location: Periplasm
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_cellular_location: Periplasm
symmetry Space Group: P 21 21 21
R_factor 0.191 R_Free 0.256
crystal
cell
length a length b length c angle alpha angle beta angle gamma
58.330 67.848 98.629 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.44 Å
ligand NA, NAG enzyme Hydrolase E.C.3.2.1 BRENDA
related structures by homologous chain: 1D0M, 1QDT
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceCrystal structure of Escherichia coli lytic transglycosylase Slt35 reveals a lysozyme-like catalytic domain with an EF-hand., van Asselt EJ, Dijkstra AJ, Kalk KH, Takacs B, Keck W, Dijkstra BW, Structure Fold Des 1999 Oct 15;7(10):1167-80. PMID:10545329
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (59 Kb) [Save to disk]
  • Biological Unit Coordinates (1qut.pdb1.gz) 54 Kb
  • LPC: Ligand-Protein Contacts for 1QUT
  • CSU: Contacts of Structural Units for 1QUT
  • Likely Quarternary Molecular Structure file(s) for 1QUT
  • Structure Factors (96 Kb)
  • Retrieve 1QUT in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1QUT from S2C, [Save to disk]
  • Re-refined 1qut structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 1QUT in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1QUT
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1QUT, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1quta_, region A [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1qut] [1qut_A]
  • SWISS-PROT database: [P41052]
  • Domain organization of [MLTB_ECOLI] by SWISSPFAM
  • Other resources with information on 1QUT
  • Community annotation for 1QUT at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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