1RIY	Dna Binding Protein	date	Nov 18, 2003
title	Hu Mutant V42i From Thermotoga Maritima
authors	C.Kavounis, K.Petratos, P.Tucker, C.E.Vorgias
compound		source
Molecule: Hu Dna-Binding Protein Chain: A Synonym: Histone-Like Dna Binding Protein Engineered: Yes Mutation: Yes		Organism_scientific: Thermotoga Maritima Organism_taxid: 2336 Gene: Hup Expression_system: Escherichia Coli Bl21(De3) Expression_system_taxid: 469008 Expression_system_strain: Bl21(De3) Expression_system_vector_type: Plasmid Expression_system_plasmid: Pet-11a-Hutmar
symmetry	Space Group: P 43 21 2	R_factor 0.216 R_Free 0.286
crystal cell	length a length b length c angle alpha angle beta angle gamma 45.447 45.447 76.204 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	1.80 Å
related structures	by homologous chain: 1B8Z
Gene Ontology	Chain Function Process Component A

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (16 Kb) [Save to disk] Biological Unit Coordinates (1riy.pdb1.gz) 22 Kb CSU: Contacts of Structural Units for 1RIY Likely Quarternary Molecular Structure file(s) for 1RIY Structure Factors (51 Kb) Retrieve 1RIY in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 1RIY from S2C, [Save to disk] Re-refined 1riy structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 1RIY in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 1RIY

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 1RIY, from MSDmotif at EBI Classification of representative domains in scop (Structural Classification of Proteins)     - Domain d1riya_, region A [Jmol] [rasmolscript] [script source]

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1riy] [1riy_A] SWISS-PROT database: [P36206] Domain organization of [DBH_THEMA] by SWISSPFAM Domain found in 1RIY: [BHL ] by SMART

Other resources with information on 1RIY

Community annotation for 1RIY at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

Movements, Movies and Images

Images from IMB Jena Image Library of Biological Macromolecules.

You may enter another PDB ID code

Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]

---

OCA© by Jaime Prilusky, 1996-2014,2022 Bioinformatics Unit Weizmann Institute of Science

---