1S6L Lyase date Jan 25, 2004
title Solution Structure Of Merb, The Organomercurial Lyase Involv Bacterial Mercury Resistance System
authors P.Di Lello, G.C.Benison, H.Valafar, K.E.Pitts, A.O.Summers, P.Leg J.G.Omichinski
compound source
Molecule: Alkylmercury Lyase
Chain: A
Synonym: Organomercurial Lyase
Ec: 4.99.1.2
Engineered: Yes
Organism_scientific: Escherichia Coli
Organism_taxid: 562
Gene: Merb
Expression_system: Escherichia Coli Bl21(De3)
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet21b
methodSolution NMR
ligand
enzyme Lyase E.C.4.99.1.2 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceNMR structural studies reveal a novel protein fold for MerB, the organomercurial lyase involved in the bacterial mercury resistance system., Di Lello P, Benison GC, Valafar H, Pitts KE, Summers AO, Legault P, Omichinski JG, Biochemistry 2004 Jul 6;43(26):8322-32. PMID:15222745
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (980 Kb) [Save to disk]
  • Biological Unit Coordinates (1s6l.pdb1.gz) 50 Kb
  • CSU: Contacts of Structural Units for 1S6L
  • Experimental data, such as chemical shifts, at BioMagResBank (BMRB)
  • NMR Restraints Grid from BioMagResBank (BMRB)
  • Retrieve 1S6L in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1S6L from S2C, [Save to disk]
  • View 1S6L in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1S6L
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1S6L, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1s6l] [1s6l_A]
  • SWISS-PROT database: [P77072]
  • Domain organization of [MERB_ECOLX] by SWISSPFAM
  • Other resources with information on 1S6L
  • Community annotation for 1S6L at PDBWiki (http://pdbwiki.org)
  • NMR Ensemble (OLDERADO: core, domain and representative structure database)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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