1SMZ Transport Protein date Mar 10, 2004
title Structure Of Transportan In Phospholipid Bicellar Solution
authors E.Barany-Wallje, A.Andersson, L.Maler, A.Graslund
compound source
Molecule: Transportan In Bicellar Solution With [Dmpc][Dhp
Chain: A
Engineered: Yes
 Synthetic: Yes
Other_details: The Protein Was Chemically Synthesized. This Does Not Occur Naturally.
methodSolution NMR
note 1SMZ is a representative structure
Primary referenceNMR solution structure and position of transportan in neutral phospholipid bicelles., Barany-Wallje E, Andersson A, Graslund A, Maler L, FEBS Lett 2004 Jun 4;567(2-3):265-9. PMID:15178334
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (181 Kb) [Save to disk]
  • Biological Unit Coordinates (1smz.pdb1.gz) 7 Kb
  • CSU: Contacts of Structural Units for 1SMZ
  • Original NMR restraints for 1SMZ from PDB
  • Retrieve 1SMZ in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1SMZ from S2C, [Save to disk]
    • View 1SMZ in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 1SMZ
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1SMZ, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1smza_, region A [Jmol] [rasmolscript] [script source]
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1smz] [1smz_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 1SMZ
  • Community annotation for 1SMZ at PDBWiki (http://pdbwiki.org)
  • NMR Ensemble (OLDERADO: core, domain and representative structure database)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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