1SOR Membrane Protein date Mar 15, 2004
title Aquaporin-0 Membrane Junctions Reveal The Structure Of A Clo Pore
authors T.Gonen, P.Sliz, J.Kistler, Y.Cheng, T.Walz
compound source
Molecule: Aquaporin-0
Chain: A
Synonym: Mip
 Organism_scientific: Ovis Aries
Organism_common: Sheep
Organism_taxid: 9940
symmetry Space Group: P 4 2 2
R_factor 0.299 R_Free 0.338
crystal
cell
length a length b length c angle alpha angle beta angle gamma
65.500 65.500 160.000 90.00 90.00 90.00
method Electron Crystallographyresolution 3.00 Å
related structures by homologous chain: 1YMG
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceAquaporin-0 membrane junctions reveal the structure of a closed water pore., Gonen T, Sliz P, Kistler J, Cheng Y, Walz T, Nature 2004 May 13;429(6988):193-7. PMID:15141214
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (39 Kb) [Save to disk]
  • Biological Unit Coordinates (1sor.pdb1.gz) 278 Kb
  • CSU: Contacts of Structural Units for 1SOR
  • Likely Quarternary Molecular Structure file(s) for 1SOR
  • Structure Factors (61 Kb)
  • Retrieve 1SOR in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1SOR from S2C, [Save to disk]
  • Re-refined 1sor structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 1SOR in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 1SOR
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1SOR, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1sora_, region A [Jmol] [rasmolscript] [script source]
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1sor] [1sor_A]
  • SWISS-PROT database: [Q6J8I9]
  • Domain organization of [MIP_SHEEP] by SWISSPFAM
    • Other resources with information on 1SOR
  • Community annotation for 1SOR at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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