1T5G	Hydrolase	date	May 04, 2004
title	Arginase-F2-L-Arginine Complex
authors	E.Cama, S.Pethe, J.L.Boucher, S.Han, F.A.Emig, D.E.Ash, R.E.Viola D.Mansuy, D.W.Christianson
compound		source
Molecule: Arginase 1 Chain: A, B, C Synonym: Liver-Type Arginase Ec: 3.5.3.1 Engineered: Yes		Organism_scientific: Rattus Norvegicus Organism_common: Norway Rat Organism_taxid: 10116 Gene: Arg1 Expression_system: Escherichia Coli Expression_system_taxid: 562
symmetry	Space Group: P 32	R_factor 0.228 R_Free 0.254
crystal cell	length a length b length c angle alpha angle beta angle gamma 87.720 87.720 104.520 90.00 90.00 120.00
method	X-Ray Diffraction	resolution	2.40 Å
ligand	ARG, F, MN	enzyme	Hydrolase E.C.3.5.3.1 BRENDA
related structures	by homologous chain: 1HQ5, 1P8R
Gene Ontology	Chain Function Process Component A, C, B
Primary reference	Inhibitor coordination interactions in the binuclear manganese cluster of arginase., Cama E, Pethe S, Boucher JL, Han S, Emig FA, Ash DE, Viola RE, Mansuy D, Christianson DW, Biochemistry 2004 Jul 20;43(28):8987-99. PMID:15248756

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (150 Kb) [Save to disk] Biological Unit Coordinates (1t5g.pdb1.gz) 144 Kb LPC: Ligand-Protein Contacts for 1T5G CSU: Contacts of Structural Units for 1T5G Likely Quarternary Molecular Structure file(s) for 1T5G Retrieve 1T5G in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 1T5G from S2C, [Save to disk]

View 1T5G in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 1T5G

Ramachandran plot from PDBSum

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 1T5G, from MSDmotif at EBI Classification of representative domains in scop (Structural Classification of Proteins)     - Domain d1t5ga_, region A [Jmol] [rasmolscript] [script source]     - Domain d1t5gb_, region B [Jmol] [rasmolscript] [script source]     - Domain d1t5gc_, region C [Jmol] [rasmolscript] [script source] Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH Summaries and structural analyses of PDB data files from PDBSum Identification of Protein Pockets & Cavities at CASTp

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1t5g_C] [1t5g_B] [1t5g] [1t5g_A] SWISS-PROT database: [P07824] Domain organization of [ARGI1_RAT] by SWISSPFAM

Other resources with information on 1T5G

Community annotation for 1T5G at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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